Archive for May, 2025

S7I1+: The largest anomeric effect exhibited by sulfur.

Wednesday, May 21st, 2025

In this series of posts about the electronic effects in small sulfur rings[1] I have explored increasingly large induced geometric effects. Here is the largest so far, for the compound S7I1+[2]

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References

  1. H. Rzepa, "5-Imino-5λ<sup>4</sup>-heptathiepane 3-oxide. More exuberent anomeric effects.", 2025. https://doi.org/10.59350/rzepa.28615
  2. J. Passmore, G. Sutherland, P. Taylor, T.K. Whidden, and P.S. White, "Preparations and x-ray crystal structures of iodo-cyclo-heptasulfur hexafluoroantimonate(V) and hexafluoroarsenate(V), S7ISbF6 and S7IAsF6", Inorganic Chemistry, vol. 20, pp. 3839-3845, 1981. https://doi.org/10.1021/ic50225a048

5-Imino-5λ4-heptathiepane 3-oxide. More exuberent anomeric effects.

Tuesday, May 20th, 2025

The two previous  posts[1],[2] on the topic of anomeric effects in 7-membered sulfur rings illustrated how orbital interactions between the lone pairs in the molecules and S-S bonds produced widely varying S-S bond lengths in the molecules, some are shorter than normal (which is ~2.05Å for e.g. the S8 ring) by ~ 0.1Å and some are longer by ~0.24Å. Here we extend this to the unknown molecule shown below.

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References

  1. H. Rzepa, "Cycloheptasulfur sulfoxide, S<sub>7</sub>O – Anomeric effects galore!", 2025. https://doi.org/10.59350/rzepa.28515
  2. H. Rzepa, "Cyclo-Heptasulfur, S<sub>7</sub> – a classic anomeric effect discovered during a pub lunch!", 2025. https://doi.org/10.59350/rzepa.28407

Cycloheptasulfur sulfoxide, S7O – Anomeric effects galore!

Monday, May 19th, 2025

The monosulfoxide of cyclo-heptasulfur was reported along with cycloheptasulfur itself in 1977,[1] along with the remarks that “The δ modification of S7 contains bonds of widely differing length: this has never been observed before in an unsubstituted molecule. and “the same effect having also been observed in other sulfur rings (S8O, S7I1+ and S7O).” Here I take a look at the last of these other molecules, the monosulfoxide of S7, as a follow up to the commentary on S7 itself.[2]

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References

  1. R. Steudel, R. Reinhardt, and T. Sandow, "Bond Interaction in Sulfur Rings: Crystal and Molecular Structure of <i>cyclo</i>‐Heptasulfur Oxide, S<sub>7</sub>O", Angewandte Chemie International Edition in English, vol. 16, pp. 716-716, 1977. https://doi.org/10.1002/anie.197707161
  2. H. Rzepa, "Cyclo-Heptasulfur, S<sub>7</sub> – a classic anomeric effect discovered during a pub lunch!", 2025. https://doi.org/10.59350/rzepa.28407

Cyclo-Heptasulfur, S7 – a classic anomeric effect discovered during a pub lunch!

Friday, May 16th, 2025

Way back in 1977, the crystal structure of the sulfur ring S7 was reported.[1] The authors noted that “The δ modification of S7 contains bonds of widely differing length: this has never been observed before in an unsubstituted molecule.” No explanation was offered, although they note that similar effects have been observed in S8O, S7I+ and S7O. The S7 molecule was yesterday brought to my attention (thanks Derek!) over a pub lunch and in the time honoured manner of scientists, sketched out on a napkin – with a pen obtained from the waitress!. As an “organic chemist”, I immediately thought “anomeric effects”. And so indeed it has proven. A calculation using the MN15L/Def2-TZVPP DFT method and analysis using the Weinhold NBO7 procedure[2] reveals the following structure (with Cs symmetry) and indeed the four unique S-S distances are all different (experimental values in parentheses). So how does this arise?

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References

  1. R. Steudel, R. Reinhardt, and F. Schuster, "Crystal and Molecular Structure of <i>cyclo</i>‐Heptasulfur (δ‐S<sub>7</sub>)", Angewandte Chemie International Edition in English, vol. 16, pp. 715-715, 1977. https://doi.org/10.1002/anie.197707151
  2. H. Rzepa, "Cyclo-Heptasulfur, S7 – a classic anomeric effect discovered during a pub lunch!", 2025. https://doi.org/10.14469/hpc/15228