Properties of Rapamycin

Rapamycin is a macrolide antibiotic with immunosuppressant properties. The physical properties of rapamycin are diplayed in the table below:

Names

Rapamycin, sirolimus, Rapamune, 1,18-dihydroxy-12-
[2-(4-hydroxy-3-methoxy-cyclohexyl) -1-methyl-ethyl]-
19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36
-dioxa-4-aza-tricyclo[30.3.1.0%4,9&]hexatriaconta-16
,24,26,28-tetraene-2,3,10,14,20-pentaone

Chemical formula

C51H79NO13

Molecular weight

914.18

Melting Point

183-185 C

CAS Registry Number

53123-88-9

Beilstein Registry Number

604010

Optical Rotatory Power

Type [alpha]

Optical Rotatory Power -58.2 deg

Wavelength 589 nm

Temperature 25 C

(Source of information: Beilstein) 

 

1H and 13C NMR assignments2

In CDCl3 rapamycin exists as a mixture of conformers in a 3:1 ratio, which complicates the NMR spectrum. In the table below the chemical shifts of the carbons and hydrogens of the major isomer only are given.

Carbon No.

Carbon Type

Major carbon

Major proton

Carbon No.

Carbon Type

Major carbon

Major proton

1

C=O

169.2

-
28

CH-OH

77.3

4.17

2

CH

51.3

5.29

29

C=C

136.1

-
3

CH2

27.0

2.34, 1.76

30

CH=C

126.8

5.42

4

CH2

20.6

1.78, 1.47

31

CH

46.6

3.33

5

CH2

25.3

1.75, 1.48

32

C=O

208.2

-
6

CH2

44.2

3.59, 3.44

33

CH2

40.7

2.74, 2.60

8

C=O

166.8

-
34

CH-OCO

75.7

5.17

9

C=O

192.5

-
35

CH

33.1

1.98

10

O-C-OH

98.5

-
36

CH2

38.4

1.22, 1.12

11

CH

33.7

1.98

37

CH

33.2

1.39

12

CH2

27.3

1.60, 1.60

38

CH2

34.2

2.10, 0.68

13

CH2

31.3

1.62, 1.33

39

CH-OCH3

84.4

2.93

14

67.2

3.86

40

CH-OH

73.9

3.37

15

CH2

38.8

1.85, 1.52

41

CH2

31.3

1.99, 1.33

16

CH-OCH3

84.4

3.67

42

CH2

31.7

1.70, 1.00

17

C=C

135.5

-
43

11-CH3

16.2

0.95

18

CH=C

129.6

5.97

44

17-CH3

10.2

1.65

19

CH=C

126.4

6.39

45

23-CH3

21.5

1.05

20

CH=C

133.6

6.32

46

25-CH3

13.8

1.00

21

CH=C

130.1

6.15

47

29-CH3

13.0

1.74

22

CH=C

140.2

5.54

48

31-CH3

16.0

1.11

23

CH

35.2

2.32

49

35-CH3

15.9

0.92

24

CH2

40.2

1.50, 1.20

50

16-OCH3

55.8

3.13

25

CH

41.4

2.74

51

27-OCH3

59.5

3.34

26

C=O

215.6

-
52

39-OCH3

56.5

3.41

27

CH-OCH3

84.9

3.71



For information on cancer tumour activity of rapamycin see:

http://dtp.nci.nih.gov/docs/static_pages/compounds/226080.html

 

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