{"id":7633,"date":"2012-09-12T11:23:16","date_gmt":"2012-09-12T10:23:16","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=7633"},"modified":"2012-09-12T11:23:16","modified_gmt":"2012-09-12T10:23:16","slug":"the-history-of-stereochemical-notation-a-search-for-the-earliest-example","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633","title":{"rendered":"The history of stereochemical notation: a search for the earliest example."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"7633\">\n<p>All organic chemists are familiar with the stereochemical notation for bonds, as shown below. But I had difficulty tracking down when it was introduced, and by whom. I offer a suggestion here, but if anyone reading this blog has got a better\/earlier attribution, please let us know!<\/p>\n<p><img decoding=\"async\" class=\"aligncenter size-full wp-image-7634\" title=\"stereochemistry\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/stereochemistry.svg\" alt=\"\" \/><\/p>\n<p>I suggest that the source is an article written by Derek Barton and R. C. Cookson in 1955 and published in 1956, entitled &#8220;The principles of conformational analysis&#8221; (DOI:\u00a0<a href=\"http:\/\/dx.doi.org\/10.1039\/QR9561000044\">http:\/\/dx.doi.org\/10.1039\/QR9561000044<\/a>\u00a0). Some examples are shown below. Compound<strong> 19<\/strong> makes explicit the Fischer convention; <strong>26\/27<\/strong> are indeed very modern, and<strong> 66<\/strong> uses not wedges but bold bonds (which is very common nowadays but suffers from having a slightly different semantic interpretation which was proposed by <a href=\"http:\/\/dx.doi.org\/10.1021\/ed062p114\" target=\"_blank\">Maehr<\/a>).<\/p>\n<p style=\"text-align: center;\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter  wp-image-7636\" title=\"Barton1\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/Barton1.jpg\" alt=\"\" width=\"128\" height=\"198\" \/><img loading=\"lazy\" decoding=\"async\" width=\"432\" height=\"176\" class=\"aligncenter  wp-image-7637\" title=\"Barton3\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/Barton3.jpg\" alt=\"\" \/><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-7638\" title=\"Barton4\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/Barton4.jpg\" alt=\"\" width=\"256\" height=\"255\" \/><\/p>\n<p>One might ask what another master of the period, R. B. Woodward was using. Thus in his 1956 article on <a href=\"http:\/\/dx.doi.org\/10.1021\/ja01594a039\" target=\"_blank\">the synthesis of lysergic acid<\/a>, we see this. Plenty of stereochemistry, but not annotated as per above! What you do find \u00a0(and with Barton as well) is essentially <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=7267\" target=\"_blank\">modern use of the arrow pushing conventions<\/a>, so by this period it was thoroughly established.<img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-7639\" title=\"woodward\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/woodward.jpg\" alt=\"\" width=\"344\" height=\"240\" \/><\/p>\n<p>Going back to 1951, we see Stork offering a <a href=\"http:\/\/dx.doi.org\/10.1021\/ja01153a552\" target=\"_blank\">stereospecific synthesis<\/a> (as far as I can tell, the first use of precisely this term in the literature). But in this example, there is no real need for clarification using the modern stereochemical notation.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-7640\" title=\"stork\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/stork.jpg\" alt=\"\" width=\"152\" height=\"152\" \/><\/p>\n<p>So, can anyone find examples of modern notation earlier than Barton&#8217;s usage?<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 7633 -->","protected":false},"excerpt":{"rendered":"<p>All organic chemists are familiar with the stereochemical notation for bonds, as shown below. But I had difficulty tracking down when it was introduced, and by whom. I offer a suggestion here, but if anyone reading this blog has got a better\/earlier attribution, please let us know! I suggest that the source is an article [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[],"tags":[46,2651,911],"ppma_author":[2661],"class_list":["post-7633","post","type-post","status-publish","format-standard","hentry","tag-derek-barton","tag-historical","tag-r-c-cookson"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.6 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>The history of stereochemical notation: a search for the earliest example. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"The history of stereochemical notation: a search for the earliest example. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"All organic chemists are familiar with the stereochemical notation for bonds, as shown below. But I had difficulty tracking down when it was introduced, and by whom. I offer a suggestion here, but if anyone reading this blog has got a better\/earlier attribution, please let us know! I suggest that the source is an article [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633\" \/>\n<meta property=\"og:site_name\" content=\"Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"article:published_time\" content=\"2012-09-12T10:23:16+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/stereochemistry.svg\" \/>\n<meta name=\"author\" content=\"Henry Rzepa\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Henry Rzepa\" \/>\n\t<meta name=\"twitter:label2\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"The history of stereochemical notation: a search for the earliest example. - Henry Rzepa&#039;s Blog","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633","og_locale":"en_GB","og_type":"article","og_title":"The history of stereochemical notation: a search for the earliest example. - Henry Rzepa&#039;s Blog","og_description":"All organic chemists are familiar with the stereochemical notation for bonds, as shown below. But I had difficulty tracking down when it was introduced, and by whom. I offer a suggestion here, but if anyone reading this blog has got a better\/earlier attribution, please let us know! I suggest that the source is an article [&hellip;]","og_url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633","og_site_name":"Henry Rzepa&#039;s Blog","article_published_time":"2012-09-12T10:23:16+00:00","og_image":[{"url":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/stereochemistry.svg","type":"","width":"","height":""}],"author":"Henry Rzepa","twitter_card":"summary_large_image","twitter_misc":{"Written by":"Henry Rzepa","Estimated reading time":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633#article","isPartOf":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633"},"author":{"name":"Henry Rzepa","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281"},"headline":"The history of stereochemical notation: a search for the earliest example.","datePublished":"2012-09-12T10:23:16+00:00","mainEntityOfPage":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633"},"wordCount":249,"commentCount":4,"image":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7633#primaryimage"},"thumbnailUrl":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/09\/stereochemistry.svg","keywords":["Derek Barton","Historical","R. 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I had previously outlined a possible mechanistic route, identifying TS3 (below) as the first transition state in which C-C bond formation creates two chiral centres. This is followed by a lower energy\u00a0TS4 where\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2018\/09\/RSS-300x231.jpg?resize=350%2C200&ssl=1","width":350,"height":200},"classes":[]},{"id":5166,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=5166","url_meta":{"origin":7633,"position":1},"title":"The perception of stereochemistry. A challenging case.","author":"Henry Rzepa","date":"October 18, 2011","format":false,"excerpt":"Most representational chemistry generated on a computer requires the viewer to achieve a remarkably subtle transformation in their mind from two to three dimensions (we are not quite yet in the era of the 3D iPad!). The Cahn-Ingold-Prelog convention was a masterwork (which won the Nobel prize). It is shown\u2026","rel":"","context":"In \"Cahn-Ingold-Prelog\"","block_context":{"text":"Cahn-Ingold-Prelog","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?tag=cahn-ingold-prelog"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/10\/13.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":17311,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=17311","url_meta":{"origin":7633,"position":2},"title":"The &#8220;hydrogen bond&#8221;; its early history.","author":"Henry Rzepa","date":"December 31, 2016","format":false,"excerpt":"My holiday reading has been Derek Lowe's excellent\u00a0Chemistry Book setting out 250 milestones in chemistry, organised by year. An\u00a0entry for 1920 entitled hydrogen bonding\u00a0seemed worth exploring in more detail here. As with many historical concepts, it can often take a few years to coalesce into something we would readily recognise\u2026","rel":"","context":"In &quot;Historical&quot;","block_context":{"text":"Historical","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=565"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/12\/066-1024x91.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":10145,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=10145","url_meta":{"origin":7633,"position":3},"title":"Feist&#8217;s acid. Stereochemistry galore.","author":"Henry Rzepa","date":"April 4, 2013","format":false,"excerpt":"Back in the days (1893) when few compounds were known, new ones could end up being named after the discoverer. Thus Feist is known for the compound bearing his name; the 2,3 carboxylic acid of methylenecyclopropane (1, with Me replaced by CO2H). Compound 1 itself nowadays is used to calibrate\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"methylene-cyclopropane","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/04\/methylene-cyclopropane.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":2144,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2144","url_meta":{"origin":7633,"position":4},"title":"Tunable bonds","author":"Henry Rzepa","date":"July 3, 2010","format":false,"excerpt":"Car transmissions come in two types, ones with fixed ratio gears, and ones which are continuously variable. When it comes to chemical bonds, we tend to think of them as being very much of the first type. Bonds come in fixed ratios; single, aromatic, double, triple, etc. OK, they do\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/07\/ultimate_anomeric.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":21499,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=21499","url_meta":{"origin":7633,"position":5},"title":"Prediction preceding experiment in chemistry &#8211; how unlucky was John Kirkwood?","author":"Henry Rzepa","date":"November 30, 2019","format":false,"excerpt":"Some areas of science progressed via very famous predictions that were subsequently verified by experiments. Think of Einstein and gravitational waves or of Dirac and the positron. There are fewer well-known examples in chemistry; perhaps Watson and Crick's prediction of the structure of DNA, albeit based on the interpretation of\u2026","rel":"","context":"In &quot;Chiroptics&quot;","block_context":{"text":"Chiroptics","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2644"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2019\/12\/butan-2-ol-ORP-1024x312.jpg?resize=350%2C200&ssl=1","width":350,"height":200},"classes":[]}],"jetpack_likes_enabled":false,"authors":[{"term_id":2661,"user_id":1,"is_guest":0,"slug":"admin","display_name":"Henry Rzepa","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","0":null,"1":"","2":"","3":"","4":"","5":"","6":"","7":"","8":""}],"_links":{"self":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7633","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=7633"}],"version-history":[{"count":2,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7633\/revisions"}],"predecessor-version":[{"id":7641,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7633\/revisions\/7641"}],"wp:attachment":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=7633"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=7633"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=7633"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fppma_author&post=7633"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}