{"id":7444,"date":"2012-08-07T06:23:59","date_gmt":"2012-08-07T05:23:59","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=7444"},"modified":"2012-08-10T09:17:10","modified_gmt":"2012-08-10T08:17:10","slug":"the-stereochemical-origins-of-the-wittig-reaction","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444","title":{"rendered":"The stereochemical origins of the Wittig reaction."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"7444\">\n<p>This is another of those textbook reactions, involving reaction of a carbonyl compound with a phosphonium ylid to form an alkene and a phosphine oxide. The reaction continues to be frequently used, in part because it can be highly stereospecific.\u00a0<\/p>\n<p style=\"text-align: center;\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter  wp-image-7445\" title=\"wittig\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg\" alt=\"\" width=\"816\" height=\"216\" \/><\/p>\n<p>Thus the<a href=\"http:\/\/en.wikipedia.org\/wiki\/Wittig_reaction\" target=\"_blank\"> standard version<\/a> tends to give <em>Z<\/em>-alkenes with good specificity, and is thought to proceed <em>via<\/em> an oxaphosphatane 4-ring intermediate. The reaction and its stereochemistry is sensitive to the reagent (including the nature of the R group), and so one model cannot capture all the aspects of this transform. Here I am starting with the very simple model shown above, where R=H (\u03c9B97XD\/6-311G(d,p)\/SCRF=tetrahydrofuran). There are four transition states to consider; whether the \u00a0rate-determining (stereochemical determining) step is TS1 or TS2, and whether the relative orientation of the two (in this example methyl) groups are <em>syn<\/em> or <em>anti<\/em>, resulting in <em>E<\/em>&#8211; or <em>Z<\/em>&#8211; alkenes. The most interesting issue would be whether the mechanism can account for why the apparently more sterically hindered route leading to the <em>Z<\/em>-alkene is often the actual outcome.\u00a0<\/p>\n<table style=\"margin-left: auto; margin-right: auto;\" border=\"0\">\n<tbody>\n<tr>\n<th colspan=\"2\">Leading to E-alkene<\/th>\n<\/tr>\n<tr>\n<td><a href=\"http:\/\/hdl.handle.net\/10042\/20278\" target=\"_blank\">TS1 0.0<\/a> kcal\/mol<\/td>\n<td><a href=\"http:\/\/hdl.handle.net\/10042\/20281\" target=\"_blank\">TS2 -3.9<\/a><\/td>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7459\" title=\"wititg-anti1_small\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS1-E-575.415563.log;frame 101; zoom 100;connect (atomno=1) (atomno=2) partial;measure 1 2;vectors on;vectors 4;vectors scale 5.0; color vectors red; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wititg-anti1_small.gif\" alt=\"\" width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7460\" title=\"wititg-anti2_small\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS2-E-575.420292.log;frame 13; zoom 100;connect (atomno=1) (atomno=5) partial;connect (atomno=6) (atomno=2) partial;measure 6 2;measure 1 5;vectors on;vectors 4;vectors scale 5.0; color vectors red; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wititg-anti2_small.gif\" alt=\"\" width=\"200\" \/><\/td>\n<\/tr>\n<tr>\n<th colspan=\"2\">Leading to Z-alkene<\/th>\n<\/tr>\n<tr>\n<td><a href=\"http:\/\/hdl.handle.net\/10042\/20280\" target=\"_blank\">TS1 0.0<\/a> kcal\/mol<\/td>\n<td><a href=\"http:\/\/hdl.handle.net\/10042\/20279\" target=\"_blank\">TS2 -2.6<\/a><\/td>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7469\" title=\"wititg-syn1\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS1-Z-575.415374.log;frame 3; zoom 100;connect (atomno=1) (atomno=2) partial;measure 1 2;vectors on;vectors 4;vectors scale 5.0; color vectors green; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wititg-syn1.gif\" alt=\"\" width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7474\" title=\"wititg-syn2\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS2-Z-575.419522.log;frame 123; zoom 100;connect (atomno=1) (atomno=2) partial;measure 1 2;vectors on;vectors 4;vectors scale 5.0; color vectors green; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wititg-syn2.gif\" alt=\"\" width=\"200\" \/><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>Key comments about these results:<\/p>\n<ol>\n<li>TS1 is higher than TS2 in both cases, and so (for these substituents) is rate determining.<\/li>\n<li>At this transition state, the two methyl groups are moving apart for the <em>E<\/em>-isomer but together for the <em>Z<\/em>-isomer. But at the transition states themselves, the steric interaction of these two groups is fairly similar, and the <em>Z<\/em>-transition state has much better antiperiplanar bond alignments compensating for the methyl clash. To put it in a nutshell, the increased steric clash for formation of the <em>Z<\/em>-isomer comes only AFTER the transition state is passed.<br \/>\n<table style=\"margin-left: auto; margin-right: auto;\" border=\"0\">\n<tbody>\n<tr>\n<th>E-alkene forming<\/th>\n<th>Z-alkene forming<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7477\" title=\"Wittig_TS1_anti\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS1-E-575.415563.log;frame 101; zoom 100;connect (atomno=1) (atomno=2) partial;measure 1 2;vectors on;vectors 4;vectors scale 5.0; color vectors red; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/Wittig_TS1_anti.jpg\" alt=\"\" width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7478\" title=\"Wittig_TS1_syn\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('white');jmolApplet([450,450],'load wp-content\/uploads\/2012\/08\/TS1-Z-575.415374.log;frame 3; zoom 100;connect (atomno=1) (atomno=2) partial;measure 1 2;vectors on;vectors 4;vectors scale 5.0; color vectors green; vibration 20;animation mode loop;');\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/Wittig_TS1_syn.jpg\" alt=\"\" width=\"200\" \/><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/li>\n<li>The gradients of the IRC profile for this step of the Wittig reveal that much of the action occurs after the transition state is passed, at IRC=3 for the <em>E<\/em> and IRC=4 for <em>Z<\/em>, this comprising rotation around the first formed C-C bond in order to create the P-O bond. This is where the steric clash of methyls for the <em>Z<\/em>-isomer really kicks in, but it has no impact upon the energy of the transition state, coming too late for that.<br \/>\n<table style=\"margin-left: auto; margin-right: auto;\" border=\"0\">\n<tbody>\n<tr>\n<th>E-alkene forming<\/th>\n<th>Z-alkene forming<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7481\" title=\"Wittig-TS1-antig\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/Wittig-TS1-antig.svg\" alt=\"\" width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-full wp-image-7480\" title=\"Wittig-TS1-syng\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/Wittig-TS1-syng.svg\" alt=\"\" width=\"200\" \/><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/li>\n<li>The model we have built is sterically incomplete; we have used PH<sub>3<\/sub> rather than eg PPh<sub>3<\/sub> (done so as to allow an IRC to be computed in a reasonable time). If we look at the models above (click on the images to get a 3D model), then it is clear that the <em>E<\/em>-transition state will suffer the greater steric clash of a methyl with one of the phenyl groups on the phosphorus than the <em>Z<\/em>-isomer will. This probably accounts for why this latter isomer is the normal stereochemical outcome.<\/li>\n<\/ol>\n<p>Much more could be done here, but even a fairly simple model of the Wittig reaction can bring a lot of insight into its unique characteristics.<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 7444 -->","protected":false},"excerpt":{"rendered":"<p>This is another of those textbook reactions, involving reaction of a carbonyl compound with a phosphonium ylid to form an alkene and a phosphine oxide. The reaction continues to be frequently used, in part because it can be highly stereospecific.\u00a0 Thus the standard version tends to give Z-alkenes with good specificity, and is thought to [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[],"tags":[843,373,903],"ppma_author":[2661],"class_list":["post-7444","post","type-post","status-publish","format-standard","hentry","tag-reaction-mechanism","tag-tutorial-material","tag-wittig-reaction"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.5 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>The stereochemical origins of the Wittig reaction. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"The stereochemical origins of the Wittig reaction. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"This is another of those textbook reactions, involving reaction of a carbonyl compound with a phosphonium ylid to form an alkene and a phosphine oxide. The reaction continues to be frequently used, in part because it can be highly stereospecific.\u00a0 Thus the standard version tends to give Z-alkenes with good specificity, and is thought to [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444\" \/>\n<meta property=\"og:site_name\" content=\"Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"article:published_time\" content=\"2012-08-07T05:23:59+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2012-08-10T08:17:10+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg\" \/>\n<meta name=\"author\" content=\"Henry Rzepa\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Henry Rzepa\" \/>\n\t<meta name=\"twitter:label2\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"2 minutes\" \/>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"The stereochemical origins of the Wittig reaction. - Henry Rzepa&#039;s Blog","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444","og_locale":"en_GB","og_type":"article","og_title":"The stereochemical origins of the Wittig reaction. - Henry Rzepa&#039;s Blog","og_description":"This is another of those textbook reactions, involving reaction of a carbonyl compound with a phosphonium ylid to form an alkene and a phosphine oxide. The reaction continues to be frequently used, in part because it can be highly stereospecific.\u00a0 Thus the standard version tends to give Z-alkenes with good specificity, and is thought to [&hellip;]","og_url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444","og_site_name":"Henry Rzepa&#039;s Blog","article_published_time":"2012-08-07T05:23:59+00:00","article_modified_time":"2012-08-10T08:17:10+00:00","og_image":[{"url":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg","type":"","width":"","height":""}],"author":"Henry Rzepa","twitter_card":"summary_large_image","twitter_misc":{"Written by":"Henry Rzepa","Estimated reading time":"2 minutes"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#article","isPartOf":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444"},"author":{"name":"Henry Rzepa","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281"},"headline":"The stereochemical origins of the Wittig reaction.","datePublished":"2012-08-07T05:23:59+00:00","dateModified":"2012-08-10T08:17:10+00:00","mainEntityOfPage":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444"},"wordCount":501,"commentCount":3,"image":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#primaryimage"},"thumbnailUrl":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg","keywords":["Reaction Mechanism","Tutorial material","Wittig reaction"],"inLanguage":"en-GB","potentialAction":[{"@type":"CommentAction","name":"Comment","target":["https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#respond"]}]},{"@type":"WebPage","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444","url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444","name":"The stereochemical origins of the Wittig reaction. - Henry Rzepa&#039;s Blog","isPartOf":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#website"},"primaryImageOfPage":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#primaryimage"},"image":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#primaryimage"},"thumbnailUrl":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg","datePublished":"2012-08-07T05:23:59+00:00","dateModified":"2012-08-10T08:17:10+00:00","author":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281"},"breadcrumb":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#breadcrumb"},"inLanguage":"en-GB","potentialAction":[{"@type":"ReadAction","target":["https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444"]}]},{"@type":"ImageObject","inLanguage":"en-GB","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#primaryimage","url":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg","contentUrl":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/08\/wittig.svg"},{"@type":"BreadcrumbList","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7444#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog"},{"@type":"ListItem","position":2,"name":"The stereochemical origins of the Wittig reaction."}]},{"@type":"WebSite","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#website","url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/","name":"Henry Rzepa&#039;s Blog","description":"Chemistry with a twist","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-GB"},{"@type":"Person","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281","name":"Henry Rzepa","image":{"@type":"ImageObject","inLanguage":"en-GB","@id":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g370be3a7397865e4fd161aefeb0a5a85","url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","contentUrl":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","caption":"Henry Rzepa"},"description":"Henry Rzepa is Emeritus Professor of Computational Chemistry at Imperial College London.","sameAs":["https:\/\/orcid.org\/0000-0002-8635-8390"],"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?author=1"}]}},"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/pDef7-1W4","jetpack-related-posts":[{"id":23281,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=23281","url_meta":{"origin":7444,"position":0},"title":"The Stevens rearrangement: how history gives us new insights.","author":"Henry Rzepa","date":"January 29, 2021","format":false,"excerpt":"In a recent post, I told the story of how in the early 1960s, Robert Woodward had encountered an unexpected stereochemical outcome to the reaction of a hexatriene, part of his grand synthesis of vitamin B12. He had constructed a model of the reaction he wanted to undertake, perhaps with\u2026","rel":"","context":"In &quot;Historical&quot;","block_context":{"text":"Historical","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=565"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/01\/sden.jpg?resize=350%2C200&ssl=1","width":350,"height":200},"classes":[]},{"id":10145,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=10145","url_meta":{"origin":7444,"position":1},"title":"Feist&#8217;s acid. Stereochemistry galore.","author":"Henry Rzepa","date":"April 4, 2013","format":false,"excerpt":"Back in the days (1893) when few compounds were known, new ones could end up being named after the discoverer. Thus Feist is known for the compound bearing his name; the 2,3 carboxylic acid of methylenecyclopropane (1, with Me replaced by CO2H). Compound 1 itself nowadays is used to calibrate\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"methylene-cyclopropane","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/04\/methylene-cyclopropane.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":12782,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=12782","url_meta":{"origin":7444,"position":2},"title":"Using a polar bond to flip the (stereochemical) outcome of a pericyclic reaction.","author":"Henry Rzepa","date":"August 4, 2014","format":false,"excerpt":"The outcome of pericyclic reactions con depend most simply on three conditions, any two of which determine the third. Whether the catalyst is \u0394 or h\u03bd (heat or light), the topology determining any stereochemistry and the participating electron count (4n+2\/4n). It is always neat to conjure up a simple switch\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":12810,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=12810","url_meta":{"origin":7444,"position":3},"title":"Using a polar bond to flip: a follow up project.","author":"Henry Rzepa","date":"August 6, 2014","format":false,"excerpt":"In my earlier post on the topic, I discussed how inverting the polarity of the C-X bond from X=O to X=Be could flip the stereochemical course of the electrocyclic pericyclic reaction of a divinyl system. An obvious question would be: what happens at the half way stage, ie X=CH2? Well,\u2026","rel":"","context":"In &quot;pericyclic&quot;","block_context":{"text":"pericyclic","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=559"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":23319,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=23319","url_meta":{"origin":7444,"position":4},"title":"The thermal reactions \u2026 took precisely the opposite stereochemical course to that which we had predicted. A non-covalent-interaction view of the model.","author":"Henry Rzepa","date":"February 3, 2021","format":false,"excerpt":"Another foray into one of the more famous anecdotal chemistry \"models\", the analysis of which led directly to the formulation of the WoodWard-Hoffmann (stereochemical) rules for pericyclic reactions. Previously, I tried to produce a modern computer model of what Woodward might have had to hand when discovering that the stereochemical\u2026","rel":"","context":"In &quot;Historical&quot;","block_context":{"text":"Historical","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=565"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/02\/yes.jpg?resize=350%2C200&ssl=1","width":350,"height":200},"classes":[]},{"id":5716,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=5716","url_meta":{"origin":7444,"position":5},"title":"A modern take on pericyclic sigmatropic migrations.","author":"Henry Rzepa","date":"November 29, 2011","format":false,"excerpt":"Another common type of pericyclic reaction is the migration of hydrogen or carbon along a conjugated chain, as in the [1,3] migration of a carbon as shown below. As before, I explore the stereochemistry of the thermal and photochemical reactions. The reaction is known to proceed thermally\u00a0with inversion of configuration\u2026","rel":"","context":"In \"pericyclic\"","block_context":{"text":"pericyclic","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?tag=pericyclic"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/11\/s.gif?resize=350%2C200","width":350,"height":200},"classes":[]}],"jetpack_likes_enabled":false,"authors":[{"term_id":2661,"user_id":1,"is_guest":0,"slug":"admin","display_name":"Henry Rzepa","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","0":null,"1":"","2":"","3":"","4":"","5":"","6":"","7":"","8":""}],"_links":{"self":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7444","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=7444"}],"version-history":[{"count":33,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7444\/revisions"}],"predecessor-version":[{"id":7492,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/7444\/revisions\/7492"}],"wp:attachment":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=7444"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=7444"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=7444"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fppma_author&post=7444"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}