{"id":4030,"date":"2011-05-13T14:27:40","date_gmt":"2011-05-13T14:27:40","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=4030"},"modified":"2011-11-29T15:09:04","modified_gmt":"2011-11-29T15:09:04","slug":"updating-a-worked-problem-in-conformational-analysis-part-1-the-question","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=4030","title":{"rendered":"Updating a worked problem in conformational analysis. Part 1: the question."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"4030\">\n<p>Conformational analysis comes from the classical renaissance of physical organic chemistry in the 1950s and 60s. The following problem is taken from\u00a0E. D. Hughes and J. Wilby <strong><em>J. Chem. Soc.<\/em><\/strong>, 1960, 4094-4101, DOI: <a href=\"http:\/\/dx.doi.org\/10.1039\/JR9600004094\">10.1039\/JR9600004094<\/a>, the essence of which is that <a href=\"http:\/\/en.wikipedia.org\/wiki\/August_Wilhelm_von_Hofmann\" target=\"_blank\">Hofmann<\/a> elimination of a neomenthyl derivative (C below) was observed as <em><strong>anomalously<\/strong><\/em> faster than its menthyl analogue. Of course, what is anomalous in one decade is a standard student problem (and one Nobel prize) five decades later.<\/p>\n<div id=\"attachment_4031\" style=\"width: 395px\" class=\"wp-caption aligncenter\"><a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl.jpg\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-4031\" class=\"size-full wp-image-4031\" title=\"menthyl\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl.jpg\" alt=\"\" width=\"385\" height=\"320\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl.jpg 1539w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl-300x249.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl-1024x851.jpg 1024w\" sizes=\"auto, (max-width: 385px) 100vw, 385px\" \/><\/a><p id=\"caption-attachment-4031\" class=\"wp-caption-text\">Hofmann elimination from a family of cyclic systems.<\/p><\/div>\n<p>One can pose two questions about these systems:<\/p>\n<ol>\n<li>What is the expected product formed by reaction of A-D; E or F or both?<\/li>\n<li>Can the four reactions be ranked in the order fastest to slowest (the hint that C is anomalously fast may or may not be given the students!)<\/li>\n<\/ol>\n<p>Its a problem that simply requires a model to be built for its solution. And probably some hints. I give the students two:<\/p>\n<ol>\n<li>Each of the reactants can have two alternative chair conformations; let us call them A1 and A2 etc (although a really adventurous student might ask if any twist-boats are also possible). In general, only one of these two can react to eliminate the trimethylammonium group to form an alkene. The task is to determine which, and whether that also reveals whether E or F or both might be formed.<\/li>\n<li>The rate of reaction (all other things being equal, which they might not be) will be related to the concentration of the active conformation compared to the inactive one. So one has to decide which of the two conformations is likely to be lower in energy, and by how much. Here one can bring as many rules as you might find in the texts books (or <a href=\"http:\/\/www.ch.ic.ac.uk\/local\/organic\/conf\/\" target=\"_blank\">lecture courses<\/a>) to bear whilst you decide. If you are really keen, you can try building a model using suitable molecular modelling software.<\/li>\n<\/ol>\n<p>So that I do not spoil your fun, I will not reveal (my) answers here, but <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=4038\" target=\"_blank\">in the next post<\/a>. Try writing down answers to these two questions, and see if they agree with mine!<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 4030 -->","protected":false},"excerpt":{"rendered":"<p>Conformational analysis comes from the classical renaissance of physical organic chemistry in the 1950s and 60s. The following problem is taken from\u00a0E. D. Hughes and J. Wilby J. Chem. Soc., 1960, 4094-4101, DOI: 10.1039\/JR9600004094, the essence of which is that Hofmann elimination of a neomenthyl derivative (C below) was observed as anomalously faster than its [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[],"tags":[48,17,528,24,529,373],"ppma_author":[2661],"class_list":["post-4030","post","type-post","status-publish","format-standard","hentry","tag-chair","tag-conformational-analysis","tag-cyclic-systems","tag-energy","tag-suitable-molecular-modelling-software","tag-tutorial-material"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Updating a worked problem in conformational analysis. Part 1: the question. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=4030\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Updating a worked problem in conformational analysis. Part 1: the question. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"Conformational analysis comes from the classical renaissance of physical organic chemistry in the 1950s and 60s. The following problem is taken from\u00a0E. D. Hughes and J. Wilby J. Chem. Soc., 1960, 4094-4101, DOI: 10.1039\/JR9600004094, the essence of which is that Hofmann elimination of a neomenthyl derivative (C below) was observed as anomalously faster than its [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=4030\" \/>\n<meta property=\"og:site_name\" content=\"Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"article:published_time\" content=\"2011-05-13T14:27:40+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2011-11-29T15:09:04+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/05\/menthyl.jpg\" \/>\n<meta name=\"author\" content=\"Henry Rzepa\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Henry Rzepa\" \/>\n\t<meta name=\"twitter:label2\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"2 minutes\" \/>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Updating a worked problem in conformational analysis. 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