{"id":28367,"date":"2025-04-08T14:11:16","date_gmt":"2025-04-08T13:11:16","guid":{"rendered":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=28367"},"modified":"2025-07-22T09:03:40","modified_gmt":"2025-07-22T08:03:40","slug":"referencing-and-citing-a-science-based-blog-post","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=28367","title":{"rendered":"Referencing and citing a science-based blog post."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"28367\">\n<p>Back in early 2012, I pondered about the relationships between a science-based blog post and a science-based journal article<span id=\"cite_ITEM-28367-0\" name=\"citation\"><a href=\"#ITEM-28367-0\">[1]<\/a><\/span>. This was in part induced by my discovering a blog plugin called <strong>Kcite<\/strong>, which allow a journal articles to be appended to the blog in the form of a numbered reference list. The only required input for Kcite was the DOI of the article (as you can see earlier in this paragraph). For around 500 posts after that moment, I always strove to add such references to my posts. Around 2016, I started including references to data in the form of repository DOIs to sit alongside the journal references, but this feature stopped working a year or two later because of changes in the metadata resolved by the DOI. Kcite itself lasted until January 2024 for this blog, when a required update to the software running the blog (WordPress) meant that it no longer worked and had to be removed as a plugin. Two years ago, <a href=\"https:\/\/rogue-scholar.org\/\" target=\"_blank\" rel=\"noopener\">Rogue Scholar<\/a> (<em>Science blogging on steroids<\/em>) started coming along to the rescue.<span id=\"cite_ITEM-28367-1\" name=\"citation\"><a href=\"#ITEM-28367-1\">[2]<\/a><\/span> ,<span id=\"cite_ITEM-28367-2\" name=\"citation\"><a href=\"#ITEM-28367-2\">[3]<\/a><\/span> It provides some amazing automated features and infrastructure to blogs; I will illustrate from those listed on the top page of Rogue Scholar itself:<\/p>\n<ol>\n<li><i>No waiting time \u2014 blogs can join via a simple form. Blog posts are automatically archived within minutes after publication on your blog.<\/i><\/li>\n<li><i>No fees \u2014 blog posts are archived without fees to either readers or authors. Rogue Scholar is sustained by donations and sponsorships.<\/i><\/li>\n<li><i>Archived \u2014 blog posts are archived by Rogue Scholar, and semiannually by the Internet Archive Archive-It service.<\/i><\/li>\n<li><i>Findable \u2014 every blog post is searchable via rich metadata and full-text search.<\/i><\/li>\n<li><i>Citeable \u2014 every blog post is assigned a Digital Object Identifier (DOI), to make them citable and trackable. Rogue Scholar shows citations to blog posts found by Crossref.<\/i><\/li>\n<li><i>Interoperable \u2014 metadata are distributed via Crossref and ORCID, and downstream services using their metadata catalogs.<\/i><\/li>\n<li><i>Reusable \u2014 the full-text of every blog post is distributed under the terms of the Creative Commons Attribution 4.0 license.<\/i><\/li>\n<li>C<i>ommunities \u2014 blog posts automatically become part of communities for your blog, the blog subject area, and topic communities based on blog post tags.<\/i><\/li>\n<\/ol>\n<p>Part of the stuff that goes on behind the scenes is integration with CrossRef (which handles information about journal articles) and that in turn enables insights such as how Blogs abstracted by Rogue Scholar can be cited within journal articles and other blogs and gives some idea of the impact that these blogs are making. Here I illustrate some searches so enabled by having Rogue Scholar abstract a blog;<\/p>\n<ol>\n<li><a href=\"https:\/\/rogue-scholar.org\/search?q=references:*&amp;sort=newest\" target=\"_new\" rel=\"noopener\">https:\/\/rogue-scholar.org\/search?q=references:*&amp;sort=newest<\/a> This shows that Rogue Scholar has captured (currently) 2003 references abstracted from blogs.<\/li>\n<li><a href=\"https:\/\/rogue-scholar.org\/communities\/rzepa\/records?q=references:*&amp;sort=newest\" target=\"_new\">https:\/\/rogue-scholar.org\/communities\/rzepa\/records?q=references:*&amp;sort=newest<\/a> Of these (currently) 504 have come from mostly identifying the <span id=\"cite_ITEM-28367-3\" name=\"citation\"><a href=\"#ITEM-28367-3\">[4]<\/a><\/span> entries in my own blogs.<\/li>\n<li><a href=\"https:\/\/rogue-scholar.org\/search?q=citations:*&amp;sort=newest\" target=\"_new\">https:\/\/rogue-scholar.org\/search?q=citations:*&amp;sort=newest<\/a> shows all citations of the blogs in the Rogue Scholar community, currently at 519.<\/li>\n<li><a href=\"https:\/\/rogue-scholar.org\/search?q=citations:10.59350\/*&amp;sort=newest\" target=\"_new\" rel=\"noopener\">https:\/\/rogue-scholar.org\/search?q=citations:10.59350\/*&amp;sort=newest<\/a> This lists the number of citations originating from the \u00a0DOI prefix 10.59350 (which is that of the Rogue Scholar community).<\/li>\n<li><a href=\"https:\/\/docs.rogue-scholar.org\/dashboard\" target=\"_new\">https:\/\/docs.rogue-scholar.org\/dashboard<\/a> lists other statistics. This are revealing, indicating currently only 6% of posts currently have references, although the uptake of institutional origins (ROR) and researcher ID (ORCID) is much better.<br \/>\n<img decoding=\"async\" class=\"aligncenter size-full wp-image-28389\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2025\/04\/Screenshot-451.jpg\" alt=\"\" width=\"540\" \/><\/li>\n<li>The distribution amongst subject areas is 6.8% in the chemical sciences:<img decoding=\"async\" class=\"aligncenter size-full wp-image-28387\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2025\/04\/Screenshot-450.jpg\" alt=\"\" width=\"540\" \/><\/li>\n<\/ol>\n<p>Meanwhile, work is under way to resuscitate the Kcite plugin, so that references are once again collected at the bottom of each post. Meanwhile, such a list can instead be found at the archived version of the posts at Rogue Scholar, as for example for this post itself. Also for the future is identifying how many of the references cited in blogs relate to research objects such as journal articles, and how many are instead to data held in<em> e.g.<\/em> data repositories. Such data reference richness in journal articles themselves is gradually increasing<span id=\"cite_ITEM-28367-4\" name=\"citation\"><a href=\"#ITEM-28367-4\">[5]<\/a><\/span>,<span id=\"cite_ITEM-28367-5\" name=\"citation\"><a href=\"#ITEM-28367-5\">[6]<\/a><\/span> and it to be hoped also in science-based blogs themselves in the future.<br \/>\n<a href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2025\/04\/Screenshot-454.jpg\"><img decoding=\"async\" class=\"aligncenter size-full wp-image-28395\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2025\/04\/Screenshot-454.jpg\" alt=\"\" width=\"520\" \/><\/a><\/p>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-28367-0\">H. Rzepa, \"The blog post as a scientific article: citation management\", 2012. <a href=\"https:\/\/doi.org\/10.59350\/3pbz1-vcd67\">https:\/\/doi.org\/10.59350\/3pbz1-vcd67<\/a>\n\n<\/li>\n<li id=\"ITEM-28367-1\">M. Fenner, \"Automatically list all your publications in your blog\", 2013. <a href=\"https:\/\/doi.org\/10.53731\/axtz227-73n18e7\">https:\/\/doi.org\/10.53731\/axtz227-73n18e7<\/a>\n\n<\/li>\n<li id=\"ITEM-28367-2\">M. Fenner, \"Rogue Scholar now shows citations of science blog posts\", 2025. <a href=\"https:\/\/doi.org\/10.53731\/4bvt3-hmd07\">https:\/\/doi.org\/10.53731\/4bvt3-hmd07<\/a>\n\n<\/li>\n<li id=\"ITEM-28367-3\"><a href=\"https:\/\/doi.org\/\">https:\/\/doi.org\/<\/a>\n\n<\/li>\n<li id=\"ITEM-28367-4\">H. Rzepa, \"Finding and Discovery Aids as part of data availability statements for research articles.\", 2025. <a href=\"https:\/\/doi.org\/10.59350\/th26w-gev67\">https:\/\/doi.org\/10.59350\/th26w-gev67<\/a>\n\n<\/li>\n<li id=\"ITEM-28367-5\">D.C. Braddock, S. Lee, and H.S. Rzepa, \"Modelling kinetic isotope effects for Swern oxidation using DFT-based transition state theory\", <i>Digital Discovery<\/i>, vol. 3, pp. 1496-1508, 2024. <a href=\"https:\/\/doi.org\/10.1039\/d3dd00246b\">https:\/\/doi.org\/10.1039\/d3dd00246b<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 28367 -->","protected":false},"excerpt":{"rendered":"<p>Back in early 2012, I pondered about the relationships between a science-based blog post and a science-based journal article. This was in part induced by my discovering a blog plugin called Kcite, which allow a journal articles to be appended to the blog in the form of a numbered reference list. The only required input [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[2],"tags":[],"ppma_author":[2661],"class_list":["post-28367","post","type-post","status-publish","format-standard","hentry","category-chemical-it"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Referencing and citing a science-based blog post. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=28367\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Referencing and citing a science-based blog post. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"Back in early 2012, I pondered about the relationships between a science-based blog post and a science-based journal article. 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I show the results for the\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":27133,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=27133","url_meta":{"origin":28367,"position":1},"title":"A peak behind the (hosting) scenes of this blog.","author":"Henry Rzepa","date":"June 15, 2024","format":false,"excerpt":"I should start by saying that the server on which this blog is posted was set up in June 1993. Although the physical object has been replaced a few times, and had\u00a0been \"virtualised\" about 15 years ago, a\u00a0small number of the underlying software base components may well date way back,\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":18205,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=18205","url_meta":{"origin":28367,"position":2},"title":"\u03c0-Facial hydrogen bonds to alkynes (revisited): how close can an acidic hydrogen approach?","author":"Henry Rzepa","date":"April 17, 2017","format":false,"excerpt":"Following on from my re-investigation of close hydrogen bonding contacts to the \u03c0-face of alkenes, here now is an updated scan for H-bonds to alkynes. The search query (dataDOI: 10.14469\/hpc\/2478) is similar to the previous one: QA is any of N,O,F,Cl. X is any atom, including metals and non-metals. The\u2026","rel":"","context":"In &quot;crystal_structure_mining&quot;","block_context":{"text":"crystal_structure_mining","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=1745"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2017\/04\/triple-inter-1024x672.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":26523,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=26523","url_meta":{"origin":28367,"position":3},"title":"More examples of &#8220;double-headed&#8221; curly arrows: S and C Nucleophiles attacking acetyl chloride","author":"Henry Rzepa","date":"October 12, 2023","format":false,"excerpt":"In an earlier post on this topic,\u2021 I described how the curly-arrows describing the mechanism of a nucleophilic addition at a carbonyl group choreograph in two distinct ways, as seen in red or blue below. The arrows in red can be described as firstly addition to the carbonyl group to\u2026","rel":"","context":"In \"Interesting chemistry\"","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?tag=interesting-chemistry"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":12728,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=12728","url_meta":{"origin":28367,"position":4},"title":"Data nightmares: B40 and counting its \u03c0-electrons","author":"Henry Rzepa","date":"July 19, 2014","format":false,"excerpt":"Whilst clusters of carbon atoms are well-known, my eye was caught by a recent article describing the detection of a cluster of boron atoms, B40 to be specific. My interest was in how the \u03c3 and \u03c0-electrons were partitioned. 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