{"id":26147,"date":"2023-06-18T15:36:29","date_gmt":"2023-06-18T14:36:29","guid":{"rendered":"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=26147"},"modified":"2023-07-12T12:43:44","modified_gmt":"2023-07-12T11:43:44","slug":"diberyllocene","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=26147","title":{"rendered":"Diberyllocene &#8212; and Lithioborocene?"},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"26147\">\n<p>Sometimes, the properties of a molecule are predicted long before it is synthesised. One such is diberyllocene. I first encountered a related molecule, beryllocene itself, many moons ago.<span id=\"cite_ITEM-26147-0\" name=\"citation\"><a href=\"#ITEM-26147-0\">[1]<\/a><\/span> This was unusual because unlike the original metallocenes, the metal atom was not symmetrically disposed between the two cyclopentadienyl faces. Now diberyllocene is finally reported in which replacing one Be by Be-Be induces (according to calculation, D<sub>2<\/sub>) symmetry<span id=\"cite_ITEM-26147-1\" name=\"citation\"><a href=\"#ITEM-26147-1\">[2]<\/a><\/span>. I will not repeat the excellent analysis of the wavefunction reported in this article, but confine myself to showing two molecular orbitals which examplify its bonding.<\/p>\n<table border=\"1\">\n<tbody>\n<tr>\n<th>Highest occupied molecular orbital<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" onclick=\"jmolApplet([450,450],'load wp-content\/uploads\/2023\/06\/diberyllocene-2_mo39.xyz;isosurface color orange purple wp-content\/uploads\/2023\/06\/diberyllocene-2_mo39.jvxl translucent;','c2');\" class=\"aligncenter size-full wp-image-26149\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-20.jpg\" alt=\"\" width=\"450\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-20.jpg 929w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-20-300x207.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-20-768x529.jpg 768w\" sizes=\"(max-width: 929px) 100vw, 929px\" \/><\/td>\n<\/tr>\n<tr>\n<th>Lowest occupied \u03c0-molecular orbital<\/th>\n<\/tr>\n<tr>\n<td><img loading=\"lazy\" decoding=\"async\" onclick=\"jmolApplet([450,450],'load wp-content\/uploads\/2023\/06\/diberyllocene-2_mo25.xyz;isosurface color orange purple wp-content\/uploads\/2023\/06\/diberyllocene-2_mo25.jvxl translucent;','c3');\" class=\"aligncenter size-large wp-image-26148\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-21-1024x596.jpg\" alt=\"\" width=\"450\" height=\"262\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-21-1024x596.jpg 1024w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-21-300x174.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-21-768x447.jpg 768w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/Screenshot-21.jpg 1073w\" sizes=\"auto, (max-width: 450px) 100vw, 450px\" \/><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>The HOMO (FAIR data <a href=\"https:\/\/doi.org\/10.14469\/hpc\/12702\" rel=\"noopener\" target=\"_blank\">10.14469\/hpc\/12702<\/a>) essentially shows a Be-Be single bond, originating formally from the central Be<sub>2<\/sub><sup>2+<\/sup> dication, balanced by the two cyclopentadienyl anion ligands. Click on the images to see this orbital in \u00a03D.<\/p>\n<p>Oddly, an excited state of Be<sub>2<\/sub> on its own actually carries a <a href=\"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=3462\" target=\"_blank\" rel=\"noopener\">Be=Be double bond<\/a>, a property again predicted a long time ago by theory. The most stable \u03c0-MO in diberyllocene originates in the six electron aromatic cyclopentadienyl rings. By acquiring a share of six electrons from one Cp ring, and a share of the two electrons from the Be-Be bond, each Be atom achieves the octet of electrons known by generations of students. This is the sort of molecule that could be taught in schools at an early stage to illustrate the octet rule. And its good to know that simple new molecules illustrating this are still being discovered by chemists.<\/p>\n<hr \/>\n<p>Since this started with experimental realisation of a predicted molecule, can I suggest as a new prediction, lithioborocene, in which a B and an Li replace two Be atoms? Individually, lithiocenes, boracenes and Li-B bonds are known from crystal structures. So its not a way out prediction to combine these observations. Any friendly synthetic chemist up for the challenge?<br \/>\n<img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/lithioboracene.jpg\" alt=\"\" width=\"450\" height=\"339\" class=\"aligncenter size-large wp-image-26163\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/lithioboracene.jpg 1211w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/lithioboracene-300x226.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/lithioboracene-1024x771.jpg 1024w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/lithioboracene-768x578.jpg 768w\" sizes=\"auto, (max-width: 450px) 100vw, 450px\" \/><br \/>\n<img decoding=\"async\" onclick=\"jmolApplet([450,450],'load wp-content\/uploads\/2023\/06\/lithioborocene_mo37.xyz;isosurface color orange purple wp-content\/uploads\/2023\/06\/lithioborocene_mo37.jvxl translucent;','c4');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-5.jpg\" alt=\"\" width=\"450\" class=\"aligncenter size-full wp-image-26164\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-5.jpg 808w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-5-300x198.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-5-768x506.jpg 768w\" sizes=\"(max-width: 808px) 100vw, 808px\" \/><br \/>\n<img decoding=\"async\" onclick=\"jmolApplet([450,450],'load wp-content\/uploads\/2023\/06\/lithioborocene_mo34.xyz;isosurface color orange purple wp-content\/uploads\/2023\/06\/lithioborocene_mo34.jvxl translucent;','c5');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-4.jpg\" alt=\"\" width=\"450\"  class=\"aligncenter size-full wp-image-26165\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-4.jpg 840w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-4-300x190.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-4-768x486.jpg 768w\" sizes=\"(max-width: 840px) 100vw, 840px\" \/><\/p>\n<p><img decoding=\"async\" onclick=\"jmolApplet([450,450],'load wp-content\/uploads\/2023\/06\/lithioborocene_mo22.xyz;isosurface color orange purple wp-content\/uploads\/2023\/06\/lithioborocene_mo22.jvxl translucent;','c6');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-6.jpg\" alt=\"\" width=\"450\"  class=\"aligncenter size-full wp-image-26167\" srcset=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-6.jpg 835w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-6-300x193.jpg 300w, https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2023\/06\/diberyllocene-6-768x495.jpg 768w\" sizes=\"(max-width: 835px) 100vw, 835px\" \/><\/p>\n<hr \/>\n<p>This post has  DOI: 10.14469\/hpc\/12704<\/p>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-26147-0\">M.J.S. Dewar, and H.S. Rzepa, \"Ground states of molecules. 45. MNDO results for molecules containing beryllium\", <i>Journal of the American Chemical Society<\/i>, vol. 100, pp. 777-784, 1978. <a href=\"https:\/\/doi.org\/10.1021\/ja00471a020\">https:\/\/doi.org\/10.1021\/ja00471a020<\/a>\n\n<\/li>\n<li id=\"ITEM-26147-1\">J.T. Boronski, A.E. Crumpton, L.L. Wales, and S. Aldridge, \"Diberyllocene, a stable compound of Be(I) with a Be\u2013Be bond\", <i>Science<\/i>, vol. 380, pp. 1147-1149, 2023. <a href=\"https:\/\/doi.org\/10.1126\/science.adh4419\">https:\/\/doi.org\/10.1126\/science.adh4419<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 26147 -->","protected":false},"excerpt":{"rendered":"<p>Sometimes, the properties of a molecule are predicted long before it is synthesised. One such is diberyllocene. I first encountered a related molecule, beryllocene itself, many moons ago. This was unusual because unlike the original metallocenes, the metal atom was not symmetrically disposed between the two cyclopentadienyl faces. Now diberyllocene is finally reported in which [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[],"tags":[],"ppma_author":[2661],"class_list":["post-26147","post","type-post","status-publish","format-standard","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.5 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Diberyllocene - and Lithioborocene? - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=26147\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Diberyllocene - and Lithioborocene? - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"Sometimes, the properties of a molecule are predicted long before it is synthesised. One such is diberyllocene. I first encountered a related molecule, beryllocene itself, many moons ago. This was unusual because unlike the original metallocenes, the metal atom was not symmetrically disposed between the two cyclopentadienyl faces. 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The study reports a molecular knot with the remarkable number of eight crossings. The DOI for the 3D model is 10.5517\/CCDC.CSD.CC1M85Y0\u00a0(or click on the image above). Such\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2017\/01\/085-1021x1024.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":24027,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=24027","url_meta":{"origin":26147,"position":1},"title":"Molecules with very large dipole moments: cyclopropenium acetylide","author":"Henry Rzepa","date":"July 11, 2021","format":false,"excerpt":"Occasionally, someone comments about an old post here, asking a question. Such was the case here, when a question about the dipole moment of cyclopropenylidene arose. It turned out to be 3.5D, but this question sparked a thought about the related molecule below. Of the two resonance forms show above,\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/07\/C5H5-esp-1024x690.jpg?resize=350%2C200&ssl=1","width":350,"height":200},"classes":[]},{"id":30975,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=30975","url_meta":{"origin":26147,"position":2},"title":"The first &#8220;half-M\u00f6bius&#8221; molecule: A question about its twist?","author":"Henry Rzepa","date":"March 13, 2026","format":false,"excerpt":"The recent report of what is termed a \"half-M\u00f6bius\" molecule is generating a lot of excitement. It has its origins in a project to make odd-numbered cyclocarbons on STM (scanning tunnelling microscope) surfaces. I had discussed even-numbered cyclocarbons in another post, where I also happened to include several odd-numbered examples,\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":10990,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=10990","url_meta":{"origin":26147,"position":3},"title":"Molecule-sized pixels.","author":"Henry Rzepa","date":"August 11, 2013","format":false,"excerpt":"The ultimate reduction in size for an engineer is to a single molecule. It's been done for a car; now it has been reported for the pixel (picture-element). The molecule above (X=O, NR, R=aryl, etc) has been shown to be capable of acting as a molecular pixel. To give some\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":28233,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=28233","url_meta":{"origin":26147,"position":4},"title":"Molecules of the Year 2024: Molecular shuttle in a box.","author":"Henry Rzepa","date":"January 25, 2025","format":false,"excerpt":"This is another in the C&E News list of candidates for the Molecule of the Year, Molecular shuttle in a box Mirror-image cyclodextrin Molecular shuttle in a box Rule-bending strained alkene First soluble promethium complex Single-electron carbon-carbon bond Hot MOF for capturing carbon The molecule shown below inside the cavity\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2046,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2046","url_meta":{"origin":26147,"position":5},"title":"Chemistry with a super-twist: A molecular trefoil knot, part 1.","author":"Henry Rzepa","date":"May 31, 2010","format":false,"excerpt":"Something important happened in chemistry for the first time about 100 years ago. A molecule was built (nowadays we would say synthesized) specifically for the purpose of investigating a theory. It was cyclo-octatetraene or (CH)8, and it was made by Willst\u00e4tter and Waser to try to find out if benzene,\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/05\/metallatrefoil.jpg?resize=350%2C200","width":350,"height":200},"classes":[]}],"jetpack_likes_enabled":false,"authors":[{"term_id":2661,"user_id":1,"is_guest":0,"slug":"admin","display_name":"Henry Rzepa","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","0":null,"1":"","2":"","3":"","4":"","5":"","6":"","7":"","8":""}],"_links":{"self":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/26147","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=26147"}],"version-history":[{"count":17,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/26147\/revisions"}],"predecessor-version":[{"id":26184,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/26147\/revisions\/26184"}],"wp:attachment":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=26147"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=26147"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=26147"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fppma_author&post=26147"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}