{"id":2559,"date":"2010-09-27T15:16:41","date_gmt":"2010-09-27T14:16:41","guid":{"rendered":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2559"},"modified":"2011-06-12T09:15:12","modified_gmt":"2011-06-12T09:15:12","slug":"almost-100-years-of-lewis-structures-are-they-still-fit-for-purpose","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2559","title":{"rendered":"(Almost) 100 years of Lewis structures: are they still fit for purpose?"},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"2559\">\n<p>The molecule below was characterised in 1996 (DOI: <a href=\"http:\/\/dx.doi.org\/10.1246\/cl.1996.489\" target=\"_blank\">10.1246\/cl.1996.489<\/a>) and given the name <strong>tris(dithiolene)vanadium (IV).<\/strong> No attempt was made in the original article to give this molecule a <a href=\"http:\/\/dx.doi.org\/10.1021\/ja02261a002\" target=\"_blank\">Lewis structure<\/a> using Lewis electron pair bonds. This blog will explore some of the issues that arise when this is attempted.<sup>1<\/sup><\/p>\n<div id=\"attachment_2561\" style=\"width: 190px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-2561\" class=\"size-full wp-image-2561\" title=\"V1\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('yellow');jmolApplet([600,600],'load wp-content\/uploads\/2010\/09\/NAMPOG.cif;set measurementUnits Angstroms;measure 24 20;measure 30 29;measure 24 30;');\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/09\/V1.jpg\" alt=\"\" width=\"180\" height=\"200\" \/><p id=\"caption-attachment-2561\" class=\"wp-caption-text\">NAMPOG. <\/p><\/div>\n<p>The name given to the molecule by the chemists who made it reflects the ligand used, which we can represent as <em>cis<\/em>-HS-CH=CH-SH (<em>via<\/em> its di-sodium salt and reaction with VCl<sub>3<\/sub>). Its entry in the Cambridge crystal database is NAMPOG (which carries only the slightest of semantic or structural information). The chemical name however does carry some further information, namely the designation <em>tris<\/em> implies three fold symmetry (D<sub>3h<\/sub> in this case), and hence that all three ligands are in fact identical (structurally).<\/p>\n<p>A nominal first stab at a Lewis electron pair representation reflecting this symmetry might be as shown above.\u00a0At this point we hit a logical problem with the final component of the assigned name; the formal oxidation state of the metal is designated <strong>IV<\/strong>. However, three moles of (-)S-CH=CH-S(-) imply the ligands carry a formal charge of 6-, and that therefore the metal must be 6+, or <strong>VI<\/strong>. Six however is not an oxidation state normally exhibited by vanadium. Why did the original discoverers designate it <strong>IV<\/strong>? Well, because careful electron counting reveals the system as a whole has 161 electrons, of which 71 are designated as valence electrons, and hence it must have one unpaired valence electron. In the representation above, that electron is shown resident on the V atom with a dot, and the ESR spectrum measured for the molecule turns out to be apparently characteristic of V(IV) systems (they do not mention whether they also compared the spectra with those derived from genuine examples of \u00a0V(II), see below). This implies (as the authors note) that a total of only 4- must be delocalized over the three dithiolene ligands.<\/p>\n<p>Returning to our electron counting, of the remaining 70 valence electrons, 24 electrons are implicit above as twelve sulfur lone pairs (which are sometimes shown as double dots, but their explicit inclusion here would cause clutter) and so we presume the remaining 46 electrons must be in Lewis-like electron pair bonds. Well, the structure above implies 24 such bonds (the six C-H lines, as well as the \u00a0Hs are also omitted by convention, again to avoid clutter!). We can begin to see why the original article lacks a Lewis structure, since the one above contains too many electrons (48 rather than 46).<\/p>\n<p>How might one proceed to rescue the situation? Because a great many possible Lewis structures could be drawn, we have to learn a little more about the molecule and seek recourse in the bond lengths measured for the system. The most obvious is the C-C length, which turns out to be 1.36\u00c5, a value significantly longer than expected for a C=C double (<em>i.e.<\/em> a four electron) bond, but a little shorter than the 3-electron bond found in <em>e.g.<\/em> benzene.<\/p>\n<div id=\"attachment_2569\" style=\"width: 196px\" class=\"wp-caption aligncenter\"><a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/09\/V2.jpg\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-2569\" class=\"size-full wp-image-2569\" title=\"V2\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/09\/V2.jpg\" alt=\"\" width=\"186\" height=\"200\" \/><\/a><p id=\"caption-attachment-2569\" class=\"wp-caption-text\">A second attempt at a Lewis structure<\/p><\/div>\n<p>The Lewis structure (one of three equivalent ones) now has 5 lines in the C-C region, or ~3.3 electrons per C-C bond averaged over three ligands, which seems to match the length a little better. It also has 25 lines representing nominal electron pairs and ten sulfur lone pairs, a total of 70 electrons. The net effect of this representation is to transfer two electrons from the sulfur lone pairs to the vanadium, and hence to reduce the formal charge at the metal from 6+ to 4+, or to V(IV). This sort of behaviour, where electrons can be <em>borrowed<\/em> from a ligand and used to reduce (or oxidise) the metal they are coordinated to is called <strong><em><a href=\"http:\/\/en.wikipedia.org\/wiki\/Non-innocent_ligand\" target=\"_blank\">non-innocent behaviour<\/a><\/em><\/strong>. The dithiolene ligand is notoriously non-innocent. It results in this case in our innocent assumptions that bonds are defined by an integer number of electrons [2,(3),4,(5) or 6 as in Lewis&#8217; original classifications] are no longer adequate, and that non-integer descriptors must also be used.<\/p>\n<p>There is still one counting rule we have not inspected. To complete its valence shell to reach Kr, V needs 18 valence electrons. The representation above gives it 13. So how about the following, which ends up with a valence shell of 17 electrons for vanadium (and an oxidation state of V(II))?<\/p>\n<div id=\"attachment_2573\" style=\"width: 195px\" class=\"wp-caption aligncenter\"><a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/09\/V3.jpg\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-2573\" class=\"size-full wp-image-2573\" title=\"V3\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2010\/09\/V3.jpg\" alt=\"\" width=\"185\" height=\"200\" \/><\/a><p id=\"caption-attachment-2573\" class=\"wp-caption-text\">Third time lucky?<\/p><\/div>\n<p>This implies that the V-S bonds might be a little shorter than normal. Well in NAMPOG its 2.35\u00c5, perhaps slightly shorter than a typical V-S single bond of ~2.4\u00c5, but in fact we are now down at the noise level, and its clear that we have probably reached (if not exceeded) the limit of semantic interpretation of the Lewis model. In this case, only three (of 100s of possible) Lewis structures have been discussed, and of course they were selected only because we had some experimental information to discriminate between them. And we must be aware that whilst Lewis structures are the simplest way of analysing the electron distribution in a molecule, far more sophisticated analyses are nowadays possible. The real question is which analysis can actually result in a greater insight into the molecule? But the least that can be said about molecule NAMPOG is that it causes one to think about the problems of representing bonding (I will draw the line however at using this example in my <a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2502\" target=\"_blank\">university admissions interviews<\/a>!).<\/p>\n<p><sup>1<\/sup> I thank J. P. P. (Jimmy) Stewart for drawing this molecule on my blackboard \u00a0and hence provoking this blog post.<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 2559 -->","protected":false},"excerpt":{"rendered":"<p>The molecule below was characterised in 1996 (DOI: 10.1246\/cl.1996.489) and given the name tris(dithiolene)vanadium (IV). No attempt was made in the original article to give this molecule a Lewis structure using Lewis electron pair bonds. This blog will explore some of the issues that arise when this is attempted.1 The name given to the molecule [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[4],"tags":[144,301,2651,2648,157,105],"ppma_author":[2661],"class_list":["post-2559","post","type-post","status-publish","format-standard","hentry","category-interesting-chemistry","tag-cambridge","tag-chemical-name","tag-historical","tag-interesting-chemistry","tag-metal","tag-v"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>(Almost) 100 years of Lewis structures: are they still fit for purpose? - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2559\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"(Almost) 100 years of Lewis structures: are they still fit for purpose? - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"The molecule below was characterised in 1996 (DOI: 10.1246\/cl.1996.489) and given the name tris(dithiolene)vanadium (IV). 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