{"id":23777,"date":"2021-05-13T11:49:30","date_gmt":"2021-05-13T10:49:30","guid":{"rendered":"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=23777"},"modified":"2021-05-13T12:33:01","modified_gmt":"2021-05-13T11:33:01","slug":"a-suggestion-for-a-molecule-with-a-m%e2%a9%b8c-quadruple-bond-with-trigonal-metal-coordination","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=23777","title":{"rendered":"A suggestion for a molecule with a M\u2a78C quadruple bond with trigonal metal coordination."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"23777\">\n<p>The <a href=\"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=23588\" target=\"_blank\" rel=\"noopener\">proposed identification<\/a> of molecules with potential metal to carbon quadruple bonds, in which the metal exhibits trigonal bipyramidal coordination rather than the tetrahedral modes which have been proposed in the literature<span id=\"cite_ITEM-23777-0\" name=\"citation\"><a href=\"#ITEM-23777-0\">[1]<\/a><\/span>,<span id=\"cite_ITEM-23777-1\" name=\"citation\"><a href=\"#ITEM-23777-1\">[2]<\/a><\/span>,<span id=\"cite_ITEM-23777-2\" name=\"citation\"><a href=\"#ITEM-23777-2\">[3]<\/a><\/span> leads on to asking whether simple trigonal coordination at the metal can also sustain this theme?<\/p>\n<p>The rational for doing this is <a href=\"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=23588\" target=\"_blank\" rel=\"noopener\">the observation<\/a> for the trigonal bipyramidal molecules that repulsions between a non-bonding occupied d-orbital on the metal and one of the two putative metal to carbon \u03c3-bonds resulted in the two electrons localising into a lone pair on carbon. By removing the electrons in this metal d-orbital or by increasing its size, the C \u03c3-lone pair was encouraged to abandon some of its lone pair character and participate in a quadruple bond. <\/p>\n<p>\n<a href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/CoC-trig.svg\"><img decoding=\"async\" class=\"aligncenter size-large wp-image-23781\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/CoC-trig.svg\" alt=\"\" width=\"100\" \/><\/a><\/p>\n<p>Another way of achieving this result is explored here, with the molecule shown above. Two of the trigonal carbon ligands are pinned back by the ring to reduce any potential repulsions. As before, this complex constitutes a filled 18-valence shell metal. The calculated orbitals (\u03c9B97XD\/Def2-SVPD, FAIR DOI: <a href=\"https:\/\/doi.org\/10.14469\/hpc\/8206\" target=\"_blank\" rel=\"noopener\">10.14469\/hpc\/8206<\/a>) are shown below.<\/p>\n<table border=\"1\">\n<tbody>\n<tr>\n<th colspan=\"2\">M=Co, r = 1.493\u00c5.<\/th>\n<\/tr>\n<tr>\n<th>NBO 26, \u03c0 bond<\/th>\n<th>NBO 24, non-bonding d-orbital<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo26.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo26.jvxl;zoom 100;spin +3;','c1');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo26.png\" alt=\"\"  width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo24.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo24.jvxl;zoom 100;spin +3;','c2');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo24.png\" alt=\"\"  width=\"200\" \/><\/td>\n<\/tr>\n<tr>\n<th>NBO 23 \u03c3 bond, 0.02 au<\/th>\n<th>NBO 23 \u03c3 bond, 0.01 au<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo23.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo23s.jvxl;zoom 100;spin +3;','c3');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo23s.png\" alt=\"\"  width=\"200\" \/><\/td>\n<td><img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo23.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo23.jvxl;zoom 100;spin +3;','c4');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo23.png\" alt=\"\"  width=\"200\" \/><\/td>\n<\/tr>\n<tr>\n<th>NBO 22 \u03c0 bond<\/th>\n<th>NBO 14 \u03c3 bond<\/th>\n<\/tr>\n<tr>\n<td><img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo22.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo22.jvxl;zoom 100;spin +3;','c5');\" src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo22.png\" alt=\"\"  width=\"200\" \/><\/td>\n<td> <img decoding=\"async\" class=\"aligncenter size-medium wp-image-23596\" onclick=\"jmolApplet([200,200],'load wp-content\/uploads\/2021\/05\/Co_mo22.xyz;isosurface wp-content\/uploads\/2021\/05\/Co_mo14.jvxl;zoom 100;spin +3;','c6');\"  src=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2021\/05\/Co_mo14.png\" alt=\"\"  width=\"200\" \/>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>Despite the appearance of a bond between Co and C along the C\u2a78Co axis in the representations above (inserted off its own bat by the JSmol program), no such bond exists in the NBO list. No precedent for this kind of structure appears in the crystal structure database. <a href=\"https:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=23712\" rel=\"noopener\" target=\"_blank\">As before<\/a>, the NBO 23 \u03c3 bond at low isosurface thresholds expands to add a second layer along the Co\u2a78C axis, in which the nodal surface exists between the two layers rather than along the bond itself. It therefore constitutes a bonding orbital.<\/p>\n<p>These quadruple bond motifs involving carbon are certainly starting to emerge in unexpected places and I do wonder how many more variations on this theme will be identified. <\/p>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-23777-0\">A.J. Kalita, S.S. Rohman, C. Kashyap, S.S. Ullah, and A.K. Guha, \"Transition metal carbon quadruple bond: viability through single electron transmutation\", <i>Physical Chemistry Chemical Physics<\/i>, vol. 22, pp. 24178-24180, 2020. <a href=\"https:\/\/doi.org\/10.1039\/d0cp03436c\">https:\/\/doi.org\/10.1039\/d0cp03436c<\/a>\n\n<\/li>\n<li id=\"ITEM-23777-1\">A.J. Kalita, S.S. Rohman, C. Kashyap, S.S. Ullah, I. Baruah, L.J. Mazumder, P.P. Sahu, and A.K. Guha, \"Is a transition metal\u2013silicon quadruple bond viable?\", <i>Physical Chemistry Chemical Physics<\/i>, vol. 23, pp. 9660-9662, 2021. <a href=\"https:\/\/doi.org\/10.1039\/d1cp00598g\">https:\/\/doi.org\/10.1039\/d1cp00598g<\/a>\n\n<\/li>\n<li id=\"ITEM-23777-2\">L.F. Cheung, T. Chen, G.S. Kocheril, W. Chen, J. Czekner, and L. Wang, \"Observation of Four-Fold Boron\u2013Metal Bonds in RhB(BO&lt;sup&gt;\u2013&lt;\/sup&gt;) and RhB\", <i>The Journal of Physical Chemistry Letters<\/i>, vol. 11, pp. 659-663, 2020. <a href=\"https:\/\/doi.org\/10.1021\/acs.jpclett.9b03484\">https:\/\/doi.org\/10.1021\/acs.jpclett.9b03484<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 23777 -->","protected":false},"excerpt":{"rendered":"<p>The proposed identification of molecules with potential metal to carbon quadruple bonds, in which the metal exhibits trigonal bipyramidal coordination rather than the tetrahedral modes which have been proposed in the literature,, leads on to asking whether simple trigonal coordination at the metal can also sustain this theme? The rational for doing this is the [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[4],"tags":[],"ppma_author":[2661],"class_list":["post-23777","post","type-post","status-publish","format-standard","hentry","category-interesting-chemistry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>A suggestion for a molecule with a M\u2a78C quadruple bond with trigonal metal coordination. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=23777\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"A suggestion for a molecule with a M\u2a78C quadruple bond with trigonal metal coordination. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"The proposed identification of molecules with potential metal to carbon quadruple bonds, in which the metal exhibits trigonal bipyramidal coordination rather than the tetrahedral modes which have been proposed in the literature,, leads on to asking whether simple trigonal coordination at the metal can also sustain this theme? 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