{"id":17084,"date":"2016-11-10T16:50:19","date_gmt":"2016-11-10T16:50:19","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=17084"},"modified":"2016-12-03T10:18:54","modified_gmt":"2016-12-03T10:18:54","slug":"pidapalooza","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=17084","title":{"rendered":"Pidapalooza!"},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"17084\">\n<p>This is sent from the Pidapalooza event in Reykjavik, Iceland, and is a short collection of notable things I learnt or which attracted my attention.<\/p>\n<p>Firstly, what IS <strong>PIDapalooza<\/strong><span id=\"cite_ITEM-17084-0\" name=\"citation\"><a href=\"#ITEM-17084-0\">[1]<\/a><\/span>? Well, it&#8217;s all about persistent identifiers, but don&#8217;t let that put you off! Another way of putting it is that it&#8217;s a way of finding things scientific on the Web. Not just publications, but conferences, social media, teaching, research datasets, infrastructure, grants, organizations, instruments, scientific objects and samples and no doubt much more. These (will) live in an inter-connected eco-system, and so the idea goes, will become an integral part of how a\u00a0scientist accumulates and disseminates information nowadays. Yes, the conference itself has its own PID: <a href=\"http:\/\/doi.org\/10.5438\/11.0001\">10.5438\/11.0001<\/a>\u00a0 and the individual talks will also appear as both a collection and with their own \u00a0PID in the near future.<\/p>\n<ol>\n<li>The first example comes from WikiData, a collection of carefully curated data, from which can be dynamically assembled say a periodic table of the elements. All the data here is included from other objects, and everything is referenced by its PID. Since it&#8217;s all assembled from data, if say the name of element 118 is assigned, then it will automatically be absorbed into this presentation. <iframe loading=\"lazy\" src=\"https:\/\/tools.wmflabs.org\/ptable\/\" width=\"600\" height=\"600\" frameborder=\"0\" scrolling=\"no\" allowfullscreen=\"allowfullscreen\"><\/iframe><\/li>\n<li>This next example proved highly contentious, but is included here anyway. It is templated PIDs, as in <a href=\"http:\/\/doi.org\/10.5446\/12780#t=00:20.00:27\">http:\/\/doi.org\/10.5446\/12780#t=00:20.00:27<\/a> which allows navigation to a particular part of an object referenced by the PID. In this case a time code for a movie, but it might be say an active site in a protein, or a key atom or group in a molecular complex for example. \u00a0This might never happen (for reasons only the computer scientists currently understand!) but it does show one way in which the humble DOI might evolve.<\/li>\n<li><a href=\"http:\/\/typeregistry.org\/\">http:\/\/typeregistry.org<\/a>\u00a0exists for registering data types. It has almost no chemistry at the moment, but perhaps it should have!\u00a0<\/li>\n<li>There was a great deal about \u00a0ORCIDs, and the ways in which uses of this particular \u00a0PID are evolving. \u00a0For example, the next big effort is to use the ORCID system for organisations. \u00a0You will find my ORCID at the top of this post.<\/li>\n<li>PIDs are also being mooted for instruments. The idea is that instrumental capabilities, settings, calibration etc are often an integral part of the data acquisition for a project. So if data is generated using such a device, why not quote its \u00a0PID in any derived article so that others can more easily replicate a particular experiment in their own laboratory.<\/li>\n<li>A quote by one of the speakers was attributed to Bill Gates around 1997 &#8220;We need \u00a0banking. We don&#8217;t need banks anymore&#8221; (think how this might apply to\u00a02016. Was he correct?). \u00a0This was followed by straw men\u00a0such as:\u00a0&#8220;We need publications. We don&#8217;t need publishers anymore&#8221;. Or &#8220;We need archiving. We don&#8217;t need libraries anymore&#8221;. Just like Gates&#8217; own quote, the reality is of course far more complex.<\/li>\n<li>And PID fatigue; \u00a0I hope you are not getting too much of that at the moment.<\/li>\n<\/ol>\n<p>There are lots more I have learnt which I need to fix\/enhance\/address in our own experiments in the use of PIDs in chemistry, so I have better get on with it now!<\/p>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-17084-0\">ORCID., DataCite., Crossref., and California Digital Library., \"PIDapalooza 2016\", 2016. <a href=\"https:\/\/doi.org\/10.5438\/11.0001\">https:\/\/doi.org\/10.5438\/11.0001<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 17084 -->","protected":false},"excerpt":{"rendered":"<p>This is sent from the Pidapalooza event in Reykjavik, Iceland, and is a short collection of notable things I learnt or which attracted my attention. Firstly, what IS PIDapalooza? Well, it&#8217;s all about persistent identifiers, but don&#8217;t let that put you off! Another way of putting it is that it&#8217;s a way of finding things [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":true,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_feature_clip_id":0,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[2],"tags":[156,1914,1917,1916,437,1915,1405],"ppma_author":[2661],"class_list":["post-17084","post","type-post","status-publish","format-standard","hentry","category-chemical-it","tag-active-site","tag-bill-gates","tag-city-reykjavik","tag-country-iceland","tag-scientist","tag-social-media","tag-technologyinternet"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.2 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Pidapalooza! - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=17084\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Pidapalooza! - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"This is sent from the Pidapalooza event in Reykjavik, Iceland, and is a short collection of notable things I learnt or which attracted my attention. 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You might wonder what possible interest a chemist might have in such an apparently arcane subject, but think of it in terms of how to find the proverbial needle in a haystack in a time when needles\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":19392,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=19392","url_meta":{"origin":17084,"position":1},"title":"First, Open Access, then Open (and FAIR) Data, now Open  Citations.","author":"Henry Rzepa","date":"February 3, 2018","format":false,"excerpt":"The topic of open citations was presented at the PIDapalooza conference and represents a third component in the increasing corpus of open scientific information. David Shotton gave us an update on\u00a0\u00a0Citations as First Class data objects - Citation Identifiers and introduced (me) to the blog where he discusses this topic.\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":19366,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=19366","url_meta":{"origin":17084,"position":2},"title":"PIDapalooza 2018. A  conference like no other!","author":"Henry Rzepa","date":"January 23, 2018","format":false,"excerpt":"Another occasional conference report (day 1). So why is one about \"persistent identifiers\" important, and particularly to the chemistry domain? The PID most familiar to most chemists is the DOI (digital object identifier). In fact there are many; some 60 types have been collected by ORCID (themselves purveyors of researcher\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2018\/01\/PIDapalooza2018-723x1024.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":13676,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=13676","url_meta":{"origin":17084,"position":3},"title":"Ionizing yet more ultra-strong acids with water molecules.","author":"Henry Rzepa","date":"March 20, 2015","format":false,"excerpt":"This might be seen as cranking a handle by producing yet more examples of acids ionised by a small number of water molecules. I justify it (probably only to myself) as an exercise in how a scientist might approach a problem, and how it linearly develops with time, not necessarily\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":14224,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=14224","url_meta":{"origin":17084,"position":4},"title":"The 2015 Bradley-Mason prize for open chemistry.","author":"Henry Rzepa","date":"June 26, 2015","format":false,"excerpt":"Open principles in the sciences in general and chemistry in particular are increasingly nowadays preached from funding councils down, but it can be more of a challenge to find innovative\u00a0practitioners. Part of the problem perhaps is that many of the current reward systems for scientists do not always help promote\u2026","rel":"","context":"In &quot;Bradley-Mason Prize for Open Chemistry&quot;","block_context":{"text":"Bradley-Mason Prize for Open Chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2131"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":15626,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=15626","url_meta":{"origin":17084,"position":5},"title":"LEARN Workshop:  Embedding Research Data as part of the research cycle","author":"Henry Rzepa","date":"February 1, 2016","format":false,"excerpt":"I attended the first (of a proposed five) workshops organised by LEARN (an\u00a0EU-funded project that aims to ...Raise awareness in research data management (RDM) issues & research policy) on Friday. Here I give some quick bullet points relating to things that caught my attention and or interest. The program (and\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]}],"jetpack_likes_enabled":false,"authors":[{"term_id":2661,"user_id":1,"is_guest":0,"slug":"admin","display_name":"Henry Rzepa","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","author_category":"1","first_name":"Henry","last_name":"Rzepa","user_url":"https:\/\/orcid.org\/0000-0002-8635-8390","job_title":"","description":"Henry Rzepa is Emeritus Professor of Computational Chemistry at Imperial College London."}],"_links":{"self":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/17084","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=17084"}],"version-history":[{"count":4,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/17084\/revisions"}],"predecessor-version":[{"id":17088,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/17084\/revisions\/17088"}],"wp:attachment":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=17084"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=17084"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=17084"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fppma_author&post=17084"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}