{"id":16518,"date":"2016-06-13T13:58:16","date_gmt":"2016-06-13T12:58:16","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=16518"},"modified":"2016-06-26T08:20:04","modified_gmt":"2016-06-26T07:20:04","slug":"a-wider-look-at-%cf%80-complex-metal-alkene-compounds","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518","title":{"rendered":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"16518\">\n<p>\n\t<a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=10448\" target=\"_blank\">Previously<\/a>, I looked at the historic origins of the so-called &pi;-complex theory of metal-alkene complexes. Here I follow this up with some data mining of the crystal structure database for such structures.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg\" width=\"300\" \/>\n<\/p>\n<p>\n\tAlkene-metal &quot;&pi;-complexes&quot; have what might be called a representational problem; they do not happily fit into the standard Lewis model of using lines connecting atoms to represent electron pairs. Structure <strong>1<\/strong> was the original representation used by <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=10448\" target=\"_blank\">Dewar<\/a> intending the meaning of partial back donation from a filled metal orbital to the empty &pi;* of the alkene. At the other extreme these compounds can be called metallacyclopropanes (<strong>2<\/strong>) in which only single bonds feature (these can be thought of as representing full back bonding from metal to alkene and full forward bonding from alkene to metal). Representations <strong>3<\/strong> and <strong>4<\/strong> are a more fuzzy blend of these, implying some sort of partial bond order for the metal-carbon bonds. Taken together, they imply that the formal bond order of the C-C bond might vary between single to double. Structures <strong>1<\/strong> and <strong>2<\/strong> in particular imply that there might be two distinct ways in arranging the bonding and that &pi;-complexes and metallacyclopropanes might therefore be distinct valence-bond isomers, each potentially capable of separate existence.\n<\/p>\n<p>\n\tWhy do these representations matter? Well, I am going to mine the crystal structure database for these species to try to see if there is any evidence for a bimodal distribution in the C-C lengths, perhaps indicating evidence of the isomerism suggested above. Such a structural database is indexed against atom-pair connectivity in the first instance and then bond type; one can specify the following types of bond connecting any two atoms: <em>single<\/em>, <em>double<\/em>, <em>triple<\/em>, <em>quadruple<\/em>, <em>polymeric<\/em>, <em>delocalised<\/em>, <em>pi <\/em>and <em>any<\/em>. It is not entirely obvious which if any of these types apply to structure <strong>1<\/strong> (it is not possible to draw a bond ending at the mid-point of another bond using the Conquest structure editor); the dashed lines in structures <strong>3<\/strong> and <strong>4<\/strong> could be classed as <em>delocalised<\/em>,<em> pi<\/em>, or most generally <em>any<\/em>. The search query can be constructed thus, where the two carbons carry R which can be either H or C and all four C-R bonds are specified as acyclic (to try to avoid complications by excluding compounds such as cyclic metallacenes). Because representation <strong>1<\/strong> cannot be constructed in the editor, I am going to specify that each carbon carries four bonds of any type in the first instance. The torsion specified is defined as R-C-C-M and the full queries can be found deposited here.<span id=\"cite_ITEM-16518-0\" name=\"citation\"><a href=\"#ITEM-16518-0\">[1]<\/a><\/span>\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/zeise-sq.jpg\" width=\"300\" \/>\n<\/p>\n<p>\n\tIf the metallacyclopropane representation <strong>2<\/strong> is defined with explicit single bonds, one gets only 22 hits (no errors, no disorder, R &lt; 0.1). The distribution of C-C bond lengths is shown below. Already one sees a representational problem emerging. A true metallacyclopropane might be expected to show a C-C single bond length, say &gt; ~1.5&Aring;. But only one or two of these examples actually have this value, the most probable value being ~1.4&Aring;.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/Z-cc-single.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tUsing representation <strong>3<\/strong>, one gets 1861 hits, but as before one sees a maximum at ~1.4&Aring; with a tail reaching to both single and double bond values for the C-C distance.<sup>&Dagger;<\/sup>\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/Z-cc-double.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tIf the C-C bond is also specified as &quot;any&quot;, the hits increase to 3948, but the bond length distribution is still very similar, with no sign of any bimodal distribution.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/Z-all.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tSuch a distribution is however found if the torsions between the R-C bond vector and the C-M bond vector are plotted (for <em>all<\/em> types of bond). A large number of the complexes have a torsion &lt;90&deg;, which suggests that in fact the substituent R is probably interacting with the metal (even though this would lead to formal cyclicity, specifying R-C as acyclic does not detect this interaction). Could this be masking a bimodal distribution in the C-C lengths?\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex-torsions.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tIf the previous search is repeated, but this time specifying that all four torsions must lie in the range 90-180&deg; (the range expected for a &quot;classical&quot; alkene-metal complex and selecting only the top right hand side cluster in the plot above) the reduced value of 1051 hits are obtained, but the monomodal distribution remains.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/Z-cc-dist-4torsion-120.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tFor this last set, here is a plot of the two C-metal bond length, with colour indicating the C-C bond length, indicating the two C-metal bonds are clearly linearly correlated.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/Z-cc-dist.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tOne final variation; &nbsp;the atom on either C can only be H or a 4-coordinate (sp<sup>3<\/sup>) carbon; 645 hits. Again, a monomodal distribution centered at 1.4&Aring;.\n<\/p>\n<p>\n\tSo this foray through metal alkene complexes suggests that there is a continuum between the formal metallacyclopropane with a C-C single bond&nbsp;and the only slightly perturbed alkene-metal complex with a C=C double bond. Whilst this would not prevent any one of these compounds existing as two distinctly different valence-bond isomers, it makes it very unlikely. I had noted in an <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=15635\" target=\"_blank\">earlier post <\/a>that for molecules of the type RX&equiv;XR (X=Si, Ge, Sn, Pb) that there was indeed a clear bimodal distribution of the X-X lengths evident in the crystal structures (for a relatively small sample number). The structures <strong>1-4<\/strong> shown at the start of this post are all simply just variations in a continuum and not distinct isomers.\n<\/p>\n<p>\n\t<strong>POSTSCRIPT: <\/strong>&nbsp;I noted above the bimodel distribution in compounds involving formal triple bonds. So I repeated the search above for &pi;-complex metal-<span style=\"color:#FF0000;\"><strong>alkyne<\/strong><\/span> complexes. Specifying an acyclic C-R bond, and <em>any<\/em> for the CC bond type, one gets the following.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/c-triple-c.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tThere is now a tantalizing suggestion of two clusters, one at 1.3 and another at&nbsp;1.4&Aring;. The torsional distribution shows that the latter distance appears to be associated with much smaller torsions, whereas the top right cluster is associated with shorter lengths.\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/c-triple-c-torsions.jpg\" width=\"440\" \/>\n<\/p>\n<p>\n\tIf the torsions are restricted to the range 90-180, then the histogram looses the smaller cluster, and perhaps gains a second cluster at 1.22&Aring;? &nbsp;As I said, all quite tantalizing!\n<\/p>\n<p>\n\t<img decoding=\"async\" alt=\"\" src=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/c-triple-c-90-180.jpg\" width=\"440\" \/>\n<\/p>\n<hr \/>\n<p>\n\t<sup>&Dagger;<\/sup>The tail in all the histograms extends into the 1.1-1.3&Aring; region, which seems unreasonable for a carbon where four bonds are specified. This region probably represents errors in the crystallographic analysis or reporting. But who knows, perhaps some very unusual compounds are lurking there!\n<\/p>\n<div class=\"citizen-ex__pane\" style=\"\">\n\t&nbsp;\n<\/div>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-16518-0\">H. Rzepa, \"A wider look at the \u00cf\u0080-complex theory of metal-alkene compounds.\", 2016. <a href=\"https:\/\/doi.org\/10.14469\/hpc\/642\">https:\/\/doi.org\/10.14469\/hpc\/642<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 16518 -->","protected":false},"excerpt":{"rendered":"<p>Previously, I looked at the historic origins of the so-called &pi;-complex theory of metal-alkene complexes. Here I follow this up with some data mining of the crystal structure database for such structures. Alkene-metal &quot;&pi;-complexes&quot; have what might be called a representational problem; they do not happily fit into the standard Lewis model of using lines [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_feature_clip_id":0,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[1745],"tags":[663,1764,855,1655,1759,1402,557,1416,1763,1401,1091,1016,988,1061,157,1761,1765,1762,1757,734,1758,1760],"ppma_author":[2661],"class_list":["post-16518","post","type-post","status-publish","format-standard","hentry","category-crystal_structure_mining","tag-alkene","tag-alkene-metal-complex","tag-alkyne","tag-bond-length","tag-carbon-carbon-bond","tag-chemical-bond","tag-chemical-bonding","tag-cluster-chemistry","tag-conquest-structure-editor","tag-coordination-complex","tag-data-mining","tag-double-bond","tag-editor","tag-filled-metal-orbital","tag-metal","tag-metal-alkene-complexes","tag-metal-alkyne-complexes","tag-metal-carbon-bonds","tag-pi-backbonding","tag-search-query","tag-structural-formula","tag-transition-metal-alkyne-complex"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.8 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>A wider look at \u03c0-complex metal-alkene (and alkyne) compounds. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"Previously, I looked at the historic origins of the so-called &pi;-complex theory of metal-alkene complexes. Here I follow this up with some data mining of the crystal structure database for such structures. Alkene-metal &quot;&pi;-complexes&quot; have what might be called a representational problem; they do not happily fit into the standard Lewis model of using lines [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518\" \/>\n<meta property=\"og:site_name\" content=\"Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"article:published_time\" content=\"2016-06-13T12:58:16+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2016-06-26T07:20:04+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg\" \/>\n<meta name=\"author\" content=\"Henry Rzepa\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Henry Rzepa\" \/>\n\t<meta name=\"twitter:label2\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"5 minutes\" \/>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds. - Henry Rzepa&#039;s Blog","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518","og_locale":"en_GB","og_type":"article","og_title":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds. - Henry Rzepa&#039;s Blog","og_description":"Previously, I looked at the historic origins of the so-called &pi;-complex theory of metal-alkene complexes. Here I follow this up with some data mining of the crystal structure database for such structures. Alkene-metal &quot;&pi;-complexes&quot; have what might be called a representational problem; they do not happily fit into the standard Lewis model of using lines [&hellip;]","og_url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518","og_site_name":"Henry Rzepa&#039;s Blog","article_published_time":"2016-06-13T12:58:16+00:00","article_modified_time":"2016-06-26T07:20:04+00:00","og_image":[{"url":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg","type":"","width":"","height":""}],"author":"Henry Rzepa","twitter_card":"summary_large_image","twitter_misc":{"Written by":"Henry Rzepa","Estimated reading time":"5 minutes"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#article","isPartOf":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518"},"author":{"name":"Henry Rzepa","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281"},"headline":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds.","datePublished":"2016-06-13T12:58:16+00:00","dateModified":"2016-06-26T07:20:04+00:00","mainEntityOfPage":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518"},"wordCount":1037,"commentCount":0,"image":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#primaryimage"},"thumbnailUrl":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg","keywords":["alkene","alkene-metal complex","alkyne","Bond length","Carbon\u2013carbon bond","Chemical bond","chemical bonding","Cluster chemistry","Conquest structure editor","Coordination complex","data mining","double bond","editor","filled metal orbital","metal","metal-alkene complexes","metal-alkyne complexes","metal-carbon bonds","Pi backbonding","search query","Structural formula","Transition metal alkyne complex"],"articleSection":["crystal_structure_mining"],"inLanguage":"en-GB","potentialAction":[{"@type":"CommentAction","name":"Comment","target":["https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#respond"]}]},{"@type":"WebPage","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518","url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518","name":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds. - Henry Rzepa&#039;s Blog","isPartOf":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#website"},"primaryImageOfPage":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#primaryimage"},"image":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#primaryimage"},"thumbnailUrl":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg","datePublished":"2016-06-13T12:58:16+00:00","dateModified":"2016-06-26T07:20:04+00:00","author":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281"},"breadcrumb":{"@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#breadcrumb"},"inLanguage":"en-GB","potentialAction":[{"@type":"ReadAction","target":["https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518"]}]},{"@type":"ImageObject","inLanguage":"en-GB","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#primaryimage","url":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg","contentUrl":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2016\/06\/pi-complex.svg"},{"@type":"BreadcrumbList","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=16518#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog"},{"@type":"ListItem","position":2,"name":"A wider look at \u03c0-complex metal-alkene (and alkyne) compounds."}]},{"@type":"WebSite","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#website","url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/","name":"Henry Rzepa&#039;s Blog","description":"Chemistry with a twist","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-GB"},{"@type":"Person","@id":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/#\/schema\/person\/2b40f7b9c872a4dc1547e040a11b6281","name":"Henry Rzepa","image":{"@type":"ImageObject","inLanguage":"en-GB","@id":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g370be3a7397865e4fd161aefeb0a5a85","url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","contentUrl":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","caption":"Henry Rzepa"},"description":"Henry Rzepa is Emeritus Professor of Computational Chemistry at Imperial College London.","sameAs":["https:\/\/orcid.org\/0000-0002-8635-8390"],"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?author=1"}]}},"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/pDef7-4iq","jetpack-related-posts":[{"id":7885,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=7885","url_meta":{"origin":16518,"position":0},"title":"Alkyne metathesis: a comparison with alkene metathesis.","author":"Henry Rzepa","date":"October 8, 2012","format":false,"excerpt":"Metathesis reactions are a series of catalysed transformations which transpose the atoms in alkenes or alkynes. Alkyne metathesis is closely related to the same reaction for alkenes, and one catalyst that is specific to alkynes was introduced by Schrock (who with Grubbs won the Nobel prize for these discoveries) and\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/10\/schrock.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":10498,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=10498","url_meta":{"origin":16518,"position":1},"title":"Au and Pt \u03c0-complexes of cyclobutadiene.","author":"Henry Rzepa","date":"May 15, 2013","format":false,"excerpt":"In the preceding post, I introduced Dewar's\u00a0\u03c0-complex theory for alkene-metal compounds, outlining the molecular orbital analysis he presented, in which the filled \u03c0-MO of the alkene donates into a Ag+\u00a0empty metal orbital and back-donation occurs from a filled metal orbital into the alkene \u03c0* MO. Here I play a little\u2026","rel":"","context":"In &quot;Hypervalency&quot;","block_context":{"text":"Hypervalency","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=7"},"img":{"alt_text":"Pt-cbd","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/05\/Pt-cbd.jpeg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":8216,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=8216","url_meta":{"origin":16518,"position":2},"title":"Secrets revealed for conjugate addition to cyclohexenone using a Cu-alkyl reagent.","author":"Henry Rzepa","date":"November 4, 2012","format":false,"excerpt":"The text books say that cyclohexenone A will react with a Grignard reagent by delivery of an alkyl (anion) to the carbon of the carbonyl (1,2-addition) but if dimethyl lithium cuprate is used, a conjugate 1,4-addition proceeds, to give the product B shown below. The standard explanation is that the\u2026","rel":"","context":"In \"metal\"","block_context":{"text":"metal","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?tag=metal"},"img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2012\/11\/4.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":10448,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=10448","url_meta":{"origin":16518,"position":3},"title":"The \u03c0-complex theory of metal-alkene compounds.","author":"Henry Rzepa","date":"May 13, 2013","format":false,"excerpt":"The period 1951--1954 was a golden one for structural chemistry; proteins, DNA, Ferrocene (1952) and the one I discuss here, a bonding model for Zeise's salt (3). In\u00a0\"A review of \u03c0 Complex Theory\",\u00a0 Bull. Soc. Chim. Fr., 1951, 1 8 , C79 (it is not online) M. J. S.\u00a0Dewar\u00a0sets out\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":26812,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=26812","url_meta":{"origin":16518,"position":4},"title":"Mechanistic templates computed for the Grubbs alkene-metathesis reaction.","author":"Henry Rzepa","date":"February 19, 2024","format":false,"excerpt":"Following on from my template exploration of the Wilkinson hydrogenation catalyst, I now repeat this for the Grubbs variant of the Alkene metathesis reaction. As with the Wilkinson, here I focus on the stereochemistry of the mechanism as first suggested by Chauvin, an aspect lacking in eg the Wikipedia entry.\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":8898,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=8898","url_meta":{"origin":16518,"position":5},"title":"The gauche effect: seeking evidence by a survey of crystal structures.","author":"Henry Rzepa","date":"January 4, 2013","format":false,"excerpt":"I previously blogged about anomeric effects involving\u00a0\u03c0 electrons as donors, and my post on the conformation of 1,2-difluorethane\u00a0turned out one of the most popular. Here I thought I would present the results of searching the Cambridge crystal database for examples of the gauche effect. The basic search is defined below\u2026","rel":"","context":"In &quot;crystal_structure_mining&quot;","block_context":{"text":"crystal_structure_mining","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=1745"},"img":{"alt_text":"CCDC-search","src":"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/01\/CCDC-search.jpg?resize=350%2C200","width":350,"height":200},"classes":[]}],"jetpack_likes_enabled":false,"authors":[{"term_id":2661,"user_id":1,"is_guest":0,"slug":"admin","display_name":"Henry Rzepa","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/897b6740f7f599bca7942cdf7d7914af5988937ae0e3869ab09aebb87f26a731?s=96&d=blank&r=g","author_category":"1","first_name":"Henry","last_name":"Rzepa","user_url":"https:\/\/orcid.org\/0000-0002-8635-8390","job_title":"","description":"Henry Rzepa is Emeritus Professor of Computational Chemistry at Imperial College London."}],"_links":{"self":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/16518","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=16518"}],"version-history":[{"count":18,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/16518\/revisions"}],"predecessor-version":[{"id":16536,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=\/wp\/v2\/posts\/16518\/revisions\/16536"}],"wp:attachment":[{"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=16518"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=16518"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=16518"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fppma_author&post=16518"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}