{"id":14005,"date":"2015-05-10T08:22:07","date_gmt":"2015-05-10T07:22:07","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=14005"},"modified":"2023-09-16T18:12:01","modified_gmt":"2023-09-16T17:12:01","slug":"the-status-of-blogging-as-scientific-communication","status":"publish","type":"post","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=14005","title":{"rendered":"The status of blogging as scientific communication."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"14005\">\n<p>Blogging in chemistry remains something of a <a href=\"http:\/\/cb.openmolecules.net\/posts.php?category=Blue%20Obelisk\" target=\"_blank\" rel=\"noopener\">niche activity<\/a>, albeit with a variety of\u00a0different styles. The most common is\u00a0commentary or opinion on the scientific literature or conferencing, serving to highlight what their author considers interesting or important developments. There are even <a href=\"http:\/\/www.compchemhighlights.org\" target=\"_blank\" rel=\"noopener\">metajournals <\/a>that aggregate such commentaries. The question therefore occasionally arises; should blogs aspire to any form of permanence, or are they simply creatures of their time.<\/p>\n<p>In this blog, as you might have noticed, I take a slightly different tack. One focus is on exploring, perchance in more detail than might be found in the <em>standard text-book,\u00a0<\/em>some of the dogmas of chemistry.<em>\u00a0 <\/em>It happens that\u00a0occasionally when writing a conventional scientific article, I find myself wishing to cite such sources. This of itself raises interesting issues (such as should one cite what might be considered material that has not been peer-reviewed in the conventional manner) but the most important would be whether one should cite evanescent sources. So this brings me to the topic of this post; can a post be archived in a sense that achieves a greater perceived permanence? Nowadays, permanence tends to be associated with a digital object identifier, or DOI. So one can boil this question down to: can one assign a DOI to a blog post?<\/p>\n<p>Well, if you came to this post via the main page, you may indeed have spotted that some do have a DOI. This is an experiment I have been running with an organisation known as <a href=\"https:\/\/thewinnower.com\" target=\"_blank\" rel=\"noopener\">The Winnower<\/a>, who provide a WordPress extension to archive any individual post and assign it a (CrossRef) DOI. The archived version also includes metadata that points back to the original post.<\/p>\n<p>This archival is not yet perfect. In its current state it does not (yet) capture:<\/p>\n<ol>\n<li>Comments on any post (which could be considered a form of open peer review)<\/li>\n<li>Enhancements such as the links to Jmol\/JSmol that I associate with some of the posts<\/li>\n<li>The <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=13974\" target=\"_blank\" rel=\"noopener\">ORCID<\/a> identifier, which adds a layer of additional provenance.<\/li>\n<li>We of course do not yet know what the lifetime expectancy archiving organisations will achieve (could it be 100 years for example?).<\/li>\n<\/ol>\n<p>It does capture the citation list when there is one, and since I include citations to my data sources (for the computations performed in support of many of my posts) the archive is I think accordingly rendered more valuable.<\/p>\n<p>What brought this post on? Well, the Journal of Chemical Education has put out <a href=\"http:\/\/pubs.acs.org\/page\/jceda8\/call-for-papers\/chemical_information\" target=\"_blank\" rel=\"noopener\">a call for articles on chemical information<\/a> for a special issue. I decided to contribute by aggregating\u00a0some of my teaching related posts; indeed individually could perhaps have only appeared here as opposed to a more traditional means of dissemination such as the JCE journal itself. And I wanted to cite them using the DOI rather than simply the URL of the post. It&#8217;s an experiment, and one which I do not yet know if anyone else will try. That in some ways is the point of a blog; it <em>is<\/em> an interesting experimental vehicle!<\/p>\n<hr \/>\n<h4>Acknowledgments<\/h4>\n<p>This post has been cross-posted in PDF format at <a href=\"https:\/\/doi.org\/10.15200\/winn.143124.42703\" rel=\"noopener\" target=\"_blank\">Authorea<\/a>.<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 14005 -->","protected":false},"excerpt":{"rendered":"<p>Blogging in chemistry remains something of a niche activity, albeit with a variety of\u00a0different styles. The most common is\u00a0commentary or opinion on the scientific literature or conferencing, serving to highlight what their author considers interesting or important developments. There are even metajournals that aggregate such commentaries. The question therefore occasionally arises; should blogs aspire to [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":5,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[2],"tags":[281,341,806,1393,1392],"ppma_author":[2661],"class_list":["post-14005","post","type-post","status-publish","format-standard","hentry","category-chemical-it","tag-author","tag-chemical-information","tag-digital-object-identifier","tag-the-jce-journal","tag-the-journal-of-chemical-education"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.6 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>The status of blogging as scientific communication. - Henry Rzepa&#039;s Blog<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=14005\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"The status of blogging as scientific communication. - Henry Rzepa&#039;s Blog\" \/>\n<meta property=\"og:description\" content=\"Blogging in chemistry remains something of a niche activity, albeit with a variety of\u00a0different styles. The most common is\u00a0commentary or opinion on the scientific literature or conferencing, serving to highlight what their author considers interesting or important developments. There are even metajournals that aggregate such commentaries. 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It is fascinating how there do seem increasing signs of convergence between the blog post and the journal article. Perhaps prompted by transclusion of tools such as Jmol and LaTex into\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":19999,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=19999","url_meta":{"origin":14005,"position":1},"title":"Early &#8220;curly&#8221; (reaction) arrows. Those of Ingold in 1926.","author":"Henry Rzepa","date":"August 22, 2018","format":false,"excerpt":"In 2012, I wrote a story of the first ever reaction curly arrows, attributed to Robert Robinson in 1924. At the time there was a great rivalry between him and another UK chemist, Christopher Ingold, with the latter also asserting his claim for their use. As part of the move\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":3443,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=3443","url_meta":{"origin":14005,"position":2},"title":"Is there a difference between a scientific blog and scientific journal?","author":"Henry Rzepa","date":"January 14, 2011","format":false,"excerpt":"In my blogroll, I link to Tim Gowers' blog. He is a very eminent mathematician, and so it is interesting to see what motivates him to write a blog about mathematics. This latest post goes a large way to explaining why. He starts by speculating about the features of some\u2026","rel":"","context":"In &quot;General&quot;","block_context":{"text":"General","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=1"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":17939,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=17939","url_meta":{"origin":14005,"position":3},"title":"MOLinsight: A web portal for the processing of molecular structures by blind students.","author":"Henry Rzepa","date":"March 31, 2017","format":false,"excerpt":"Occasionally one comes across a web site that manages to combine being\u00a0unusual, interesting and also useful. Thus\u00a0www.molinsight.net\u00a0is I think a unique chemistry resource for blind and visually impaired students. If you think perhaps that it might be a little too specialised to be useful for you, go visit it first.\u2026","rel":"","context":"In &quot;Interesting chemistry&quot;","block_context":{"text":"Interesting chemistry","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=4"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":15972,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=15972","url_meta":{"origin":14005,"position":4},"title":"Does combining molecules with augmented reality have a future?","author":"Henry Rzepa","date":"March 28, 2016","format":false,"excerpt":"Augmented reality, a superset if you like of virtual reality (VR), has really been hitting the headlines recently.\u00a0Like 3D TV, its been a long time coming!\u00a0Since ~1994 or earlier, there have been explorations of\u00a0how molecular models can be transferred from actual reality to virtual reality using conventional computers (as opposed\u2026","rel":"","context":"In &quot;Chemical IT&quot;","block_context":{"text":"Chemical IT","link":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?cat=2"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":4439,"url":"https:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=4439","url_meta":{"origin":14005,"position":5},"title":"Molecular illusions and deceptions. 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